Variant report

Variant	rs36014084
Chromosome Location	chr5:94167809-94167810
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10059576	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1027741	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11135413	0.94[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs12152973	0.93[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs12152974	0.97[ASN][1000 genomes]
rs12518668	0.93[AFR][1000 genomes];0.87[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12653136	1.00[AFR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12657029	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs149198	0.84[ASN][1000 genomes]
rs153900	0.84[ASN][1000 genomes]
rs159602	0.88[ASN][1000 genomes]
rs17084077	0.96[ASN][1000 genomes]
rs17084091	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17084157	0.85[ASN][1000 genomes]
rs255212	0.88[ASN][1000 genomes]
rs255214	0.80[ASN][1000 genomes]
rs255367	0.88[ASN][1000 genomes]
rs35448590	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35749798	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4143487	0.85[ASN][1000 genomes]
rs58312534	0.93[AFR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs61614515	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6868059	0.88[ASN][1000 genomes]
rs6871880	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs718184	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs73776909	0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73776910	0.94[ASN][1000 genomes]
rs7706606	0.93[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs7707642	0.95[ASN][1000 genomes]
rs7727729	0.85[AFR][1000 genomes];0.85[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94130400-94192400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr5:94137600-94170400	Weak transcription	Primary hematopoietic stem cells	blood
3	chr5:94157000-94168200	Weak transcription	Thymus	Thymus
4	chr5:94160000-94168200	Weak transcription	GM12878-XiMat	blood
5	chr5:94162400-94184800	Weak transcription	Muscle Satellite Cultured Cells	--
6	chr5:94162600-94169600	Weak transcription	Gastric	stomach
7	chr5:94163400-94182600	Weak transcription	Brain Anterior Caudate	brain
8	chr5:94163800-94209800	Weak transcription	Dnd41	blood
9	chr5:94164000-94169000	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr5:94164000-94185800	Weak transcription	Primary T cells from cord blood	blood
11	chr5:94164600-94168600	Weak transcription	Fetal Brain Female	brain
12	chr5:94165000-94240800	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr5:94165200-94183400	Weak transcription	Lung	lung
14	chr5:94165400-94169000	Enhancers	Fetal Thymus	thymus
15	chr5:94165400-94185600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr5:94165600-94182200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
17	chr5:94165800-94172800	Weak transcription	HUVEC	blood vessel
18	chr5:94165800-94182400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr5:94165800-94183400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr5:94165800-94206200	Weak transcription	Adipose Nuclei	Adipose
21	chr5:94166000-94170400	Weak transcription	Primary monocytes fromperipheralblood	blood
22	chr5:94166000-94172200	Weak transcription	Primary neutrophils fromperipheralblood	blood

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