Variant report

Variant	rs58312534
Chromosome Location	chr5:94161316-94161317
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs10059576	0.83[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1027741	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11135413	0.95[ASN][1000 genomes]
rs12152973	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs12152974	1.00[ASN][1000 genomes]
rs12518668	0.85[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12653136	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs12657029	0.93[AFR][1000 genomes];0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs149198	0.81[ASN][1000 genomes]
rs153900	0.81[ASN][1000 genomes]
rs159602	0.86[ASN][1000 genomes]
rs17084077	0.82[AMR][1000 genomes];0.99[ASN][1000 genomes]
rs17084091	0.93[AFR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17084157	0.84[ASN][1000 genomes]
rs255212	0.86[ASN][1000 genomes]
rs255367	0.86[ASN][1000 genomes]
rs35448590	0.93[AFR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35749798	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs36014084	0.93[AFR][1000 genomes];0.85[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4143487	0.88[ASN][1000 genomes]
rs61614515	0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6868059	0.87[ASN][1000 genomes]
rs6871880	0.90[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs718184	0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73776909	0.87[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs73776910	0.91[ASN][1000 genomes]
rs7706606	0.80[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs7707642	0.98[ASN][1000 genomes]
rs7727729	0.93[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94130200-94161600	Weak transcription	HUVEC	blood vessel
2	chr5:94130400-94192400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr5:94134600-94164000	Weak transcription	Monocytes-CD14+_RO01746	blood
4	chr5:94137600-94170400	Weak transcription	Primary hematopoietic stem cells	blood
5	chr5:94140200-94163800	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr5:94148000-94164200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
7	chr5:94157000-94168200	Weak transcription	Thymus	Thymus
8	chr5:94157200-94161600	Weak transcription	Fetal Thymus	thymus
9	chr5:94160000-94168200	Weak transcription	GM12878-XiMat	blood

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