Variant report

Variant	rs4143487
Chromosome Location	chr5:94144549-94144550
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 34 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10059576	0.94[CHB][hapmap];0.97[CHD][hapmap];0.81[JPT][hapmap];0.85[ASN][1000 genomes]
rs1027741	0.94[CHB][hapmap];0.81[JPT][hapmap];0.83[YRI][hapmap];0.85[ASN][1000 genomes]
rs11135413	0.89[CHB][hapmap];0.84[ASN][1000 genomes]
rs12152973	0.94[CHB][hapmap];0.88[ASN][1000 genomes]
rs12152974	0.94[CHB][hapmap];0.97[CHD][hapmap];0.81[JPT][hapmap];0.88[ASN][1000 genomes]
rs12518668	0.94[CHB][hapmap];0.97[CHD][hapmap];0.81[JPT][hapmap];0.85[ASN][1000 genomes]
rs12653136	0.94[CHB][hapmap];0.85[ASN][1000 genomes]
rs12657029	0.85[ASN][1000 genomes]
rs149198	0.93[ASN][1000 genomes]
rs153847	0.94[CHB][hapmap];0.94[CHD][hapmap];0.87[JPT][hapmap];0.93[MEX][hapmap];0.81[ASN][1000 genomes]
rs153900	0.93[ASN][1000 genomes]
rs159602	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs17084077	0.94[CHB][hapmap];0.81[JPT][hapmap];0.87[ASN][1000 genomes]
rs17084091	0.94[CHB][hapmap];0.87[ASN][1000 genomes]
rs17084157	0.89[CHB][hapmap]
rs255212	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs255214	0.88[ASN][1000 genomes]
rs255341	0.87[JPT][hapmap]
rs255343	0.87[JPT][hapmap]
rs255348	0.87[JPT][hapmap]
rs255350	0.87[JPT][hapmap]
rs255351	0.87[JPT][hapmap]
rs255367	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];0.87[MEX][hapmap];0.97[ASN][1000 genomes]
rs35448590	0.85[ASN][1000 genomes]
rs35749798	0.81[ASN][1000 genomes]
rs36014084	0.85[ASN][1000 genomes]
rs566805	0.85[ASN][1000 genomes]
rs568600	1.00[CHB][hapmap];0.94[CHD][hapmap];0.93[JPT][hapmap];0.93[MEX][hapmap];0.84[ASN][1000 genomes]
rs58312534	0.88[ASN][1000 genomes]
rs6871880	0.85[ASN][1000 genomes]
rs718184	0.89[CHB][hapmap];0.94[CHD][hapmap];0.82[ASN][1000 genomes]
rs7706606	0.94[CHB][hapmap];0.81[JPT][hapmap];0.88[ASN][1000 genomes]
rs7707642	0.94[CHB][hapmap];0.81[JPT][hapmap];0.86[ASN][1000 genomes]
rs7727729	0.94[CHB][hapmap];0.81[JPT][hapmap];0.87[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94130200-94161600	Weak transcription	HUVEC	blood vessel
2	chr5:94130400-94145000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr5:94130400-94192400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
4	chr5:94134600-94145400	Weak transcription	Primary monocytes fromperipheralblood	blood
5	chr5:94134600-94164000	Weak transcription	Monocytes-CD14+_RO01746	blood
6	chr5:94137600-94170400	Weak transcription	Primary hematopoietic stem cells	blood
7	chr5:94140200-94163800	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr5:94142400-94145200	Weak transcription	Fetal Brain Male	brain
9	chr5:94144000-94146000	Weak transcription	Fetal Brain Female	brain
10	chr5:94144200-94144800	Weak transcription	Fetal Thymus	thymus

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