Variant report
| Variant | rs2562842 |
|---|---|
| Chromosome Location | chr2:179573394-179573395 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:179483200-179655400 | Weak transcription | Adipose Nuclei | Adipose |
| 2 | chr2:179493000-179620800 | Weak transcription | HSMM | muscle |
| 3 | chr2:179528200-179601200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 4 | chr2:179529600-179600600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 5 | chr2:179533600-179669200 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 6 | chr2:179534400-179576200 | Weak transcription | Fetal Intestine Large | intestine |
| 7 | chr2:179538400-179591800 | Weak transcription | Fetal Thymus | thymus |
| 8 | chr2:179540400-179586800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 9 | chr2:179542600-179577000 | Weak transcription | Right Ventricle | heart |
| 10 | chr2:179543200-179583400 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 11 | chr2:179543400-179596800 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 12 | chr2:179544800-179579600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 13 | chr2:179545800-179586800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 14 | chr2:179556800-179592200 | Weak transcription | Primary hematopoietic stem cells | blood |
| 15 | chr2:179561800-179575200 | Strong transcription | Fetal Heart | heart |
| 16 | chr2:179563000-179587400 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 17 | chr2:179564200-179575400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 18 | chr2:179565400-179600800 | Weak transcription | Thymus | Thymus |
| 19 | chr2:179566000-179591000 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 20 | chr2:179568400-179594000 | Strong transcription | Left Ventricle | heart |
| 21 | chr2:179568400-179603400 | Strong transcription | HSMMtube | muscle |
| 22 | chr2:179568600-179576200 | Strong transcription | Primary B cells from peripheral blood | blood |
| 23 | chr2:179568800-179596200 | Strong transcription | Fetal Muscle Leg | muscle |
| 24 | chr2:179569200-179576200 | Weak transcription | Brain Substantia Nigra | brain |
| 25 | chr2:179569400-179576800 | Weak transcription | Psoas Muscle | Psoas |
| 26 | chr2:179569400-179589800 | Weak transcription | Lung | lung |
| 27 | chr2:179570000-179578200 | Weak transcription | Pancreas | Pancrea |
| 28 | chr2:179570800-179575800 | Genic enhancers | Skeletal Muscle Male | skeletal muscle |
| 29 | chr2:179570800-179580800 | Strong transcription | Primary T helper naive cells fromperipheralblood | blood |
| 30 | chr2:179571600-179574200 | Weak transcription | Primary T cells fromperipheralblood | blood |
| 31 | chr2:179572000-179574400 | Weak transcription | Primary T helper cells fromperipheralblood | blood |
| 32 | chr2:179572400-179574600 | Weak transcription | Aorta | Aorta |
| 33 | chr2:179572600-179576800 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 34 | chr2:179573200-179574000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 35 | chr2:179573200-179574200 | Strong transcription | Skeletal Muscle Female | skeletal muscle |
| 36 | chr2:179573200-179575200 | Weak transcription | Primary T cells from cord blood | blood |
| 37 | chr2:179573200-179576800 | Weak transcription | Primary B cells from cord blood | blood |
