The 2.0 version of rSNPBase

Variant report

Variant rs72629796
Chromosome Location chr2:179391075-179391076
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179388600-179392200 Weak transcription Spleen Spleen
2 chr2:179388800-179392400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr2:179388800-179393400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr2:179388800-179393400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr2:179388800-179395800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
6 chr2:179388800-179395800 Weak transcription Placenta Placenta
7 chr2:179388800-179395800 Weak transcription Lung lung
8 chr2:179388800-179396000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr2:179388800-179396200 Weak transcription Fetal Kidney kidney
10 chr2:179388800-179396200 Weak transcription Gastric stomach
11 chr2:179388800-179396200 Weak transcription Pancreas Pancrea
12 chr2:179388800-179403600 Weak transcription Esophagus oesophagus
13 chr2:179388800-179408000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
14 chr2:179388800-179408600 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr2:179388800-179410600 Weak transcription Colonic Mucosa Colon
16 chr2:179388800-179411800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr2:179388800-179417600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr2:179388800-179429400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr2:179388800-179441800 Weak transcription Placenta Amnion Placenta Amnion
20 chr2:179388800-179448800 Weak transcription Small Intestine intestine
21 chr2:179388800-179495800 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr2:179389000-179395400 Weak transcription Fetal Stomach stomach
23 chr2:179389000-179395600 Weak transcription Fetal Intestine Small intestine
24 chr2:179389000-179395800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr2:179389000-179395800 Weak transcription Aorta Aorta
26 chr2:179389000-179396000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr2:179389000-179396000 Weak transcription Primary T cells fromperipheralblood blood
28 chr2:179389000-179396000 Weak transcription Fetal Adrenal Gland Adrenal Gland
29 chr2:179389000-179396200 Weak transcription H9 Cell Line embryonic stem cell
30 chr2:179389000-179396200 Weak transcription Brain Substantia Nigra brain
31 chr2:179389000-179396200 Weak transcription Fetal Brain Female brain
32 chr2:179389200-179395400 Weak transcription Fetal Thymus thymus
33 chr2:179389200-179396200 Weak transcription Brain Anterior Caudate brain
34 chr2:179389200-179396200 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr2:179389200-179412600 Weak transcription Pancreatic Islets Pancreatic Islet
36 chr2:179389400-179391200 Weak transcription Sigmoid Colon Sigmoid Colon
37 chr2:179389400-179391600 Weak transcription Fetal Intestine Large intestine
38 chr2:179389400-179392000 Weak transcription Primary B cells from peripheral blood blood
39 chr2:179389400-179392000 Weak transcription Primary hematopoietic stem cells blood
40 chr2:179389400-179392200 Weak transcription Primary monocytes fromperipheralblood blood
41 chr2:179389400-179392200 Weak transcription Adipose Nuclei Adipose
42 chr2:179389400-179392200 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr2:179389400-179394400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
44 chr2:179389400-179395200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr2:179389400-179395200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
46 chr2:179389400-179395600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr2:179389400-179395600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr2:179389400-179395600 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr2:179389400-179395600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr2:179389400-179395600 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015