Variant report

Variant	rs256544
Chromosome Location	chr2:190753211-190753212
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs10181618	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12693558	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1869522	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs256543	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs256547	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs256548	0.84[EUR][1000 genomes]
rs256553	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs256561	0.84[EUR][1000 genomes]
rs256565	0.94[EUR][1000 genomes]
rs256566	0.94[EUR][1000 genomes]
rs256569	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs256575	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs256576	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs256578	0.84[EUR][1000 genomes]
rs256579	0.84[EUR][1000 genomes]
rs256585	1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs256587	0.93[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6434371	0.84[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs934883	0.84[EUR][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:190744600-190758200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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