Variant report

Variant	rs2572991
Chromosome Location	chr6:70290470-70290471
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs2607730	0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2757757	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs2757758	0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs310259	0.85[ASN][1000 genomes]
rs310260	0.86[AFR][1000 genomes];0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs34857559	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4707218	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6904921	0.94[CEU][hapmap];0.91[CHB][hapmap];0.96[JPT][hapmap]
rs6908194	0.80[EUR][1000 genomes]
rs9346314	0.80[EUR][1000 genomes]
rs9351764	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9364032	0.94[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9364033	0.84[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:70288600-70291800	Enhancers	Fetal Brain Male	brain
2	chr6:70288800-70293600	Weak transcription	HSMMtube	muscle
3	chr6:70289000-70292800	Weak transcription	HSMM	muscle
4	chr6:70289000-70294400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr6:70289000-70294400	Weak transcription	Placenta Amnion	Placenta Amnion
6	chr6:70290400-70291200	Enhancers	Fetal Heart	heart
7	chr6:70290400-70292000	Enhancers	Fetal Brain Female	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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