Variant report

Variant	rs2589272
Chromosome Location	chr3:133383386-133383387
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr3:133381600..133383745-chr3:133425262..133426763,2	K562	blood:

rs_ID	r²[population]
rs2589277	0.89[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs2718800	0.94[EUR][1000 genomes]
rs2718805	1.00[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs2718810	0.82[EUR][1000 genomes]
rs4854740	1.00[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs58174274	0.94[EUR][1000 genomes]
rs61449352	0.94[EUR][1000 genomes]

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133381400-133392400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr3:133381600-133383600	Enhancers	Liver	Liver
3	chr3:133381600-133386200	Weak transcription	Fetal Stomach	stomach
4	chr3:133381600-133387200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr3:133381600-133387200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
6	chr3:133381600-133387400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
7	chr3:133381600-133387400	Weak transcription	Fetal Heart	heart
8	chr3:133381600-133388800	Weak transcription	Gastric	stomach
9	chr3:133382000-133387600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr3:133382000-133387600	Weak transcription	Placenta Amnion	Placenta Amnion
11	chr3:133382600-133387600	Weak transcription	NH-A	brain
12	chr3:133382800-133384400	Weak transcription	Primary neutrophils fromperipheralblood	blood
13	chr3:133382800-133384800	Weak transcription	Colon Smooth Muscle	Colon
14	chr3:133382800-133385600	Weak transcription	Primary T cells from cord blood	blood
15	chr3:133382800-133386200	Weak transcription	Fetal Muscle Trunk	muscle
16	chr3:133382800-133386400	Weak transcription	Fetal Thymus	thymus
17	chr3:133382800-133386600	Weak transcription	Pancreas	Pancrea
18	chr3:133382800-133387200	Weak transcription	HUES6 Cell Line	embryonic stem cell
19	chr3:133382800-133387200	Weak transcription	Placenta	Placenta
20	chr3:133382800-133387200	Weak transcription	Right Atrium	heart
21	chr3:133382800-133387400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr3:133382800-133387400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
23	chr3:133382800-133387400	Weak transcription	Fetal Muscle Leg	muscle
24	chr3:133382800-133387600	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr3:133382800-133387600	Weak transcription	Fetal Intestine Large	intestine
26	chr3:133382800-133388400	Enhancers	HepG2	liver
27	chr3:133382800-133390200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr3:133382800-133392800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
29	chr3:133383000-133383400	Weak transcription	K562	blood
30	chr3:133383000-133386800	Weak transcription	Cortex derived primary cultured neurospheres	brain
31	chr3:133383000-133387400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
32	chr3:133383000-133389000	Weak transcription	Fetal Intestine Small	intestine
33	chr3:133383000-133389000	Weak transcription	A549	lung
34	chr3:133383200-133387400	Weak transcription	Breast Myoepithelial Primary Cells	Breast

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