Variant report
| Variant | rs2606130 |
|---|---|
| Chromosome Location | chr15:52023074-52023075 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52000800-52024000 | Weak transcription | Gastric | stomach |
| 2 | chr15:52007000-52023400 | Weak transcription | Brain Anterior Caudate | brain |
| 3 | chr15:52008200-52023200 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 4 | chr15:52008400-52023400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 5 | chr15:52011400-52023400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 6 | chr15:52011600-52023400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 7 | chr15:52012400-52024200 | Weak transcription | Fetal Lung | lung |
| 8 | chr15:52013400-52023600 | Weak transcription | Colonic Mucosa | Colon |
| 9 | chr15:52013600-52028200 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 10 | chr15:52013600-52028400 | Weak transcription | Fetal Brain Female | brain |
| 11 | chr15:52013600-52028800 | Weak transcription | Fetal Muscle Trunk | muscle |
| 12 | chr15:52017200-52023400 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 13 | chr15:52017400-52023600 | Weak transcription | Placenta | Placenta |
| 14 | chr15:52017600-52023400 | Weak transcription | Fetal Intestine Large | intestine |
| 15 | chr15:52019000-52023600 | Weak transcription | Fetal Muscle Leg | muscle |
| 16 | chr15:52019000-52023800 | Weak transcription | Brain Angular Gyrus | brain |
| 17 | chr15:52019000-52028200 | Weak transcription | Brain Substantia Nigra | brain |
| 18 | chr15:52019200-52023400 | Weak transcription | Adipose Nuclei | Adipose |
| 19 | chr15:52019200-52023600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 20 | chr15:52019400-52023600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 21 | chr15:52019400-52023800 | Weak transcription | Brain Hippocampus Middle | brain |
| 22 | chr15:52019600-52023200 | Weak transcription | Fetal Stomach | stomach |
| 23 | chr15:52019600-52024000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 24 | chr15:52019800-52023600 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 25 | chr15:52019800-52023600 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 26 | chr15:52019800-52023800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 27 | chr15:52019800-52023800 | Weak transcription | Aorta | Aorta |
| 28 | chr15:52020000-52023200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 29 | chr15:52020000-52023200 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 30 | chr15:52020000-52023200 | Weak transcription | HSMMtube | muscle |
| 31 | chr15:52020000-52023200 | Weak transcription | NHEK | skin |
| 32 | chr15:52020000-52023400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 33 | chr15:52020000-52023400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 34 | chr15:52020000-52023600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 35 | chr15:52020000-52023600 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 36 | chr15:52020000-52023600 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 37 | chr15:52020000-52023600 | Weak transcription | Pancreas | Pancrea |
| 38 | chr15:52020000-52023600 | Weak transcription | Psoas Muscle | Psoas |
| 39 | chr15:52020000-52023600 | Weak transcription | Hela-S3 | cervix |
| 40 | chr15:52020000-52023600 | Weak transcription | HSMM | muscle |
| 41 | chr15:52020000-52024000 | Weak transcription | Esophagus | oesophagus |
| 42 | chr15:52020000-52024000 | Weak transcription | Right Ventricle | heart |
| 43 | chr15:52020000-52024200 | Weak transcription | Left Ventricle | heart |
| 44 | chr15:52020000-52028800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 45 | chr15:52020200-52023200 | Genic enhancers | Primary B cells from cord blood | blood |
| 46 | chr15:52020200-52023200 | Weak transcription | Colon Smooth Muscle | Colon |
| 47 | chr15:52020200-52023200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 48 | chr15:52020200-52023200 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 49 | chr15:52020200-52023200 | Weak transcription | NHLF | lung |
| 50 | chr15:52020200-52023400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
