Variant report

Variant rs2570243
Chromosome Location chr15:52138967-52138968
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:106 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52123600-52140000 Enhancers Primary T helper cells fromperipheralblood blood
2 chr15:52129000-52140200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
3 chr15:52129200-52139800 Enhancers Primary T helper cells PMA-I stimulated --
4 chr15:52129400-52140000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr15:52130000-52155000 Weak transcription Fetal Muscle Trunk muscle
6 chr15:52130800-52155200 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr15:52132200-52140200 Enhancers Primary T cells from cord blood blood
8 chr15:52132400-52139400 Enhancers Stomach Mucosa stomach
9 chr15:52133000-52143600 Enhancers NHDF-Ad bronchial
10 chr15:52133000-52146200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr15:52133200-52139600 Enhancers Primary T helper 17 cells PMA-I stimulated --
12 chr15:52133200-52139800 Enhancers Primary monocytes fromperipheralblood blood
13 chr15:52133600-52139400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
14 chr15:52133600-52139600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr15:52133600-52140000 Enhancers HMEC breast
16 chr15:52134600-52139200 Enhancers Colon Smooth Muscle Colon
17 chr15:52134600-52139400 Enhancers Primary neutrophils fromperipheralblood blood
18 chr15:52134600-52142000 Enhancers NHLF lung
19 chr15:52135000-52139400 Enhancers Duodenum Smooth Muscle Duodenum
20 chr15:52135600-52140200 Weak transcription Ovary ovary
21 chr15:52135800-52139000 Weak transcription Fetal Thymus thymus
22 chr15:52135800-52139200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr15:52135800-52139400 Enhancers K562 blood
24 chr15:52135800-52146200 Weak transcription H1 Cell Line embryonic stem cell
25 chr15:52135800-52155000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr15:52136000-52145800 Weak transcription Liver Liver
27 chr15:52136000-52155200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr15:52136200-52155000 Weak transcription Aorta Aorta
29 chr15:52136600-52153400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr15:52137000-52139600 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
31 chr15:52137000-52139600 Enhancers Fetal Lung lung
32 chr15:52137200-52139000 Enhancers HSMM muscle
33 chr15:52137200-52139200 Enhancers Skeletal Muscle Male skeletal muscle
34 chr15:52137200-52139400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
35 chr15:52137200-52139400 Enhancers Duodenum Mucosa Duodenum
36 chr15:52137200-52139400 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr15:52137200-52139400 Enhancers Fetal Heart heart
38 chr15:52137200-52139400 Enhancers Left Ventricle heart
39 chr15:52137200-52139800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr15:52137200-52140000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr15:52137200-52140600 Enhancers Primary T helper naive cells fromperipheralblood blood
42 chr15:52137200-52141600 Enhancers Primary T killer naive cells fromperipheralblood blood
43 chr15:52137400-52139000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
44 chr15:52137400-52139200 Enhancers Skeletal Muscle Female skeletal muscle
45 chr15:52137400-52139400 Enhancers Primary T cells fromperipheralblood blood
46 chr15:52137400-52139400 Enhancers Right Atrium heart
47 chr15:52137400-52139400 Enhancers Spleen Spleen
48 chr15:52137400-52139600 Enhancers Primary hematopoietic stem cells short term culture blood
49 chr15:52137400-52139600 Enhancers Dnd41 blood
50 chr15:52137400-52139600 Flanking Active TSS Hela-S3 cervix

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