Variant report

Variant rs2554307
Chromosome Location chr15:52118683-52118684
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52107200-52121400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr15:52114000-52121200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr15:52114000-52121400 Weak transcription Brain Cingulate Gyrus brain
4 chr15:52114000-52121600 Weak transcription Aorta Aorta
5 chr15:52114200-52121600 Weak transcription Psoas Muscle Psoas
6 chr15:52116600-52118800 Enhancers NHEK skin
7 chr15:52116600-52119200 Enhancers Hela-S3 cervix
8 chr15:52117400-52118800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr15:52117400-52118800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr15:52117400-52118800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
11 chr15:52117400-52118800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
12 chr15:52117400-52118800 Enhancers HMEC breast
13 chr15:52117600-52118800 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr15:52117600-52121600 Weak transcription NHDF-Ad bronchial
15 chr15:52117800-52120800 Weak transcription A549 lung
16 chr15:52118200-52120000 Weak transcription Placenta Amnion Placenta Amnion
17 chr15:52118200-52120400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr15:52118200-52121200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr15:52118400-52121000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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