The 2.0 version of rSNPBase

Variant report

Variant rs1895863
Chromosome Location chr15:52199007-52199008
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52156000-52211000 Weak transcription Brain Substantia Nigra brain
2 chr15:52167200-52210800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr15:52167600-52199600 Weak transcription ES-I3 Cell Line embryonic stem cell
4 chr15:52171000-52210800 Weak transcription Right Ventricle heart
5 chr15:52172800-52208200 Weak transcription Brain Angular Gyrus brain
6 chr15:52177200-52213600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
7 chr15:52178800-52216600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
8 chr15:52179600-52203800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
9 chr15:52179600-52259800 Strong transcription Monocytes-CD14+_RO01746 blood
10 chr15:52179800-52201600 Strong transcription Primary neutrophils fromperipheralblood blood
11 chr15:52179800-52218600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr15:52180200-52199400 Strong transcription NHEK skin
13 chr15:52180400-52218200 Strong transcription Primary T helper cells fromperipheralblood blood
14 chr15:52181200-52221000 Strong transcription Primary monocytes fromperipheralblood blood
15 chr15:52181600-52203400 Strong transcription Dnd41 blood
16 chr15:52181800-52203400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
17 chr15:52183000-52203400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
18 chr15:52183200-52223000 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr15:52183400-52203200 Strong transcription Primary T cells from cord blood blood
20 chr15:52184400-52205000 Strong transcription Rectal Mucosa Donor 29 rectum
21 chr15:52185600-52200000 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr15:52185800-52204200 Strong transcription Primary T regulatory cells fromperipheralblood blood
23 chr15:52186200-52204200 Strong transcription Primary B cells from cord blood blood
24 chr15:52186400-52199400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr15:52186400-52200200 Strong transcription Fetal Thymus thymus
26 chr15:52186400-52204200 Strong transcription Placenta Placenta
27 chr15:52186400-52219000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr15:52187800-52212000 Weak transcription Cortex derived primary cultured neurospheres brain
29 chr15:52188600-52200800 Strong transcription K562 blood
30 chr15:52188600-52202400 Strong transcription Adipose Nuclei Adipose
31 chr15:52188600-52203600 Strong transcription Primary hematopoietic stem cells blood
32 chr15:52191000-52222800 Weak transcription H9 Cell Line embryonic stem cell
33 chr15:52191600-52199800 Weak transcription Aorta Aorta
34 chr15:52192800-52199600 Weak transcription Lung lung
35 chr15:52192800-52199800 Weak transcription Gastric stomach
36 chr15:52192800-52199800 Weak transcription Pancreas Pancrea
37 chr15:52192800-52213600 Weak transcription Brain Cingulate Gyrus brain
38 chr15:52193400-52208200 Weak transcription Esophagus oesophagus
39 chr15:52193400-52209800 Weak transcription HSMMtube muscle
40 chr15:52193400-52210800 Weak transcription Brain Germinal Matrix brain
41 chr15:52193400-52227800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
42 chr15:52193400-52232800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr15:52193600-52233600 Weak transcription Fetal Brain Male brain
44 chr15:52193800-52210400 Weak transcription Brain Inferior Temporal Lobe brain
45 chr15:52193800-52216200 Weak transcription Brain Hippocampus Middle brain
46 chr15:52194000-52201400 Weak transcription Ovary ovary
47 chr15:52194200-52201600 Weak transcription Colon Smooth Muscle Colon
48 chr15:52194200-52228200 Weak transcription H1 Cell Line embryonic stem cell
49 chr15:52194200-52231600 Weak transcription Psoas Muscle Psoas
50 chr15:52194400-52199600 Weak transcription HUVEC blood vessel

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Last update: Aug 31, 2015