The 2.0 version of rSNPBase

Variant report

Variant rs72732952
Chromosome Location chr15:52237139-52237140
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52179600-52259800 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr15:52194400-52239000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr15:52200400-52262200 Weak transcription Stomach Mucosa stomach
4 chr15:52201000-52238800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr15:52204800-52238800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr15:52210000-52239000 Weak transcription Colon Smooth Muscle Colon
7 chr15:52211600-52237600 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr15:52211600-52239200 Weak transcription Right Ventricle heart
9 chr15:52212400-52241600 Weak transcription Small Intestine intestine
10 chr15:52216000-52238600 Weak transcription Pancreas Pancrea
11 chr15:52217200-52238400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr15:52217200-52238800 Weak transcription Brain Angular Gyrus brain
13 chr15:52217600-52238800 Weak transcription Skeletal Muscle Male skeletal muscle
14 chr15:52217800-52237400 Weak transcription Aorta Aorta
15 chr15:52217800-52237400 Weak transcription Brain Anterior Caudate brain
16 chr15:52217800-52239000 Weak transcription Gastric stomach
17 chr15:52218000-52243200 Weak transcription Fetal Heart heart
18 chr15:52222600-52259800 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr15:52223200-52245400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
20 chr15:52224000-52237400 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr15:52224200-52237200 Weak transcription Brain Cingulate Gyrus brain
22 chr15:52226000-52255200 Strong transcription Breast Myoepithelial Primary Cells Breast
23 chr15:52226200-52242600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr15:52226200-52254800 Strong transcription Thymus Thymus
25 chr15:52226200-52255000 Strong transcription Primary T cells fromperipheralblood blood
26 chr15:52226200-52259400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr15:52226800-52237200 Weak transcription Spleen Spleen
28 chr15:52227400-52255000 Strong transcription Liver Liver
29 chr15:52227400-52258400 Strong transcription Dnd41 blood
30 chr15:52227800-52255000 Strong transcription Rectal Mucosa Donor 31 rectum
31 chr15:52228400-52238400 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr15:52229200-52238200 Weak transcription Brain Germinal Matrix brain
33 chr15:52229400-52249000 Strong transcription Cortex derived primary cultured neurospheres brain
34 chr15:52229800-52254200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr15:52230000-52237400 Weak transcription Ovary ovary
36 chr15:52230200-52238600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr15:52230800-52237400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr15:52230800-52237600 Weak transcription Adipose Nuclei Adipose
39 chr15:52232200-52237400 Weak transcription Brain Hippocampus Middle brain
40 chr15:52232200-52238600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr15:52232200-52238800 Weak transcription K562 blood
42 chr15:52232200-52239000 Weak transcription HUVEC blood vessel
43 chr15:52232800-52256000 Strong transcription Fetal Muscle Leg muscle
44 chr15:52233000-52258000 Strong transcription Primary T helper cells fromperipheralblood blood
45 chr15:52233200-52250800 Strong transcription Sigmoid Colon Sigmoid Colon
46 chr15:52233200-52255200 Strong transcription Primary monocytes fromperipheralblood blood
47 chr15:52233200-52255200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
48 chr15:52233400-52248000 Strong transcription Primary T cells from cord blood blood
49 chr15:52233600-52258000 Strong transcription Primary B cells from peripheral blood blood
50 chr15:52233800-52237400 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015