Variant report

Variant rs2593198
Chromosome Location chr15:52238685-52238686
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52179600-52259800 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr15:52194400-52239000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr15:52200400-52262200 Weak transcription Stomach Mucosa stomach
4 chr15:52201000-52238800 Weak transcription Pancreatic Islets Pancreatic Islet
5 chr15:52204800-52238800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr15:52210000-52239000 Weak transcription Colon Smooth Muscle Colon
7 chr15:52211600-52239200 Weak transcription Right Ventricle heart
8 chr15:52212400-52241600 Weak transcription Small Intestine intestine
9 chr15:52217200-52238800 Weak transcription Brain Angular Gyrus brain
10 chr15:52217600-52238800 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr15:52217800-52239000 Weak transcription Gastric stomach
12 chr15:52218000-52243200 Weak transcription Fetal Heart heart
13 chr15:52222600-52259800 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr15:52223200-52245400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
15 chr15:52226000-52255200 Strong transcription Breast Myoepithelial Primary Cells Breast
16 chr15:52226200-52242600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr15:52226200-52254800 Strong transcription Thymus Thymus
18 chr15:52226200-52255000 Strong transcription Primary T cells fromperipheralblood blood
19 chr15:52226200-52259400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr15:52227400-52255000 Strong transcription Liver Liver
21 chr15:52227400-52258400 Strong transcription Dnd41 blood
22 chr15:52227800-52255000 Strong transcription Rectal Mucosa Donor 31 rectum
23 chr15:52229400-52249000 Strong transcription Cortex derived primary cultured neurospheres brain
24 chr15:52229800-52254200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
25 chr15:52232200-52238800 Weak transcription K562 blood
26 chr15:52232200-52239000 Weak transcription HUVEC blood vessel
27 chr15:52232800-52256000 Strong transcription Fetal Muscle Leg muscle
28 chr15:52233000-52258000 Strong transcription Primary T helper cells fromperipheralblood blood
29 chr15:52233200-52250800 Strong transcription Sigmoid Colon Sigmoid Colon
30 chr15:52233200-52255200 Strong transcription Primary monocytes fromperipheralblood blood
31 chr15:52233200-52255200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr15:52233400-52248000 Strong transcription Primary T cells from cord blood blood
33 chr15:52233600-52258000 Strong transcription Primary B cells from peripheral blood blood
34 chr15:52234400-52239000 Weak transcription Brain Substantia Nigra brain
35 chr15:52234400-52239200 Weak transcription Fetal Brain Male brain
36 chr15:52234400-52240800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr15:52234600-52238800 Weak transcription Primary T killer naive cells fromperipheralblood blood
38 chr15:52234600-52239000 Weak transcription NHDF-Ad bronchial
39 chr15:52234600-52239000 Weak transcription NHLF lung
40 chr15:52234600-52239200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr15:52234600-52239200 Weak transcription Rectal Smooth Muscle rectum
42 chr15:52234600-52242200 Weak transcription Psoas Muscle Psoas
43 chr15:52234800-52238800 Weak transcription Primary B cells from cord blood blood
44 chr15:52235600-52255000 Strong transcription Duodenum Mucosa Duodenum
45 chr15:52235600-52255200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
46 chr15:52235600-52256000 Strong transcription HUES48 Cell Line embryonic stem cell
47 chr15:52235600-52258000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr15:52235800-52255000 Strong transcription Primary T helper cells PMA-I stimulated --
49 chr15:52235800-52255000 Strong transcription A549 lung
50 chr15:52235800-52255000 Strong transcription Osteobl bone

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