Variant report
Variant | rs2554353 |
---|---|
Chromosome Location | chr15:52138408-52138409 |
allele | G/T |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr15:52123600-52140000 | Enhancers | Primary T helper cells fromperipheralblood | blood |
2 | chr15:52129000-52140200 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
3 | chr15:52129200-52139800 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
4 | chr15:52129400-52140000 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
5 | chr15:52130000-52155000 | Weak transcription | Fetal Muscle Trunk | muscle |
6 | chr15:52130800-52155200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
7 | chr15:52132200-52140200 | Enhancers | Primary T cells from cord blood | blood |
8 | chr15:52132400-52139400 | Enhancers | Stomach Mucosa | stomach |
9 | chr15:52133000-52143600 | Enhancers | NHDF-Ad | bronchial |
10 | chr15:52133000-52146200 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
11 | chr15:52133200-52139600 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
12 | chr15:52133200-52139800 | Enhancers | Primary monocytes fromperipheralblood | blood |
13 | chr15:52133600-52139400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
14 | chr15:52133600-52139600 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
15 | chr15:52133600-52140000 | Enhancers | HMEC | breast |
16 | chr15:52134600-52139200 | Enhancers | Colon Smooth Muscle | Colon |
17 | chr15:52134600-52139400 | Enhancers | Primary neutrophils fromperipheralblood | blood |
18 | chr15:52134600-52142000 | Enhancers | NHLF | lung |
19 | chr15:52134800-52138800 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
20 | chr15:52135000-52139400 | Enhancers | Duodenum Smooth Muscle | Duodenum |
21 | chr15:52135600-52140200 | Weak transcription | Ovary | ovary |
22 | chr15:52135800-52138600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
23 | chr15:52135800-52139000 | Weak transcription | Fetal Thymus | thymus |
24 | chr15:52135800-52139200 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
25 | chr15:52135800-52139400 | Enhancers | K562 | blood |
26 | chr15:52135800-52146200 | Weak transcription | H1 Cell Line | embryonic stem cell |
27 | chr15:52135800-52155000 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
28 | chr15:52136000-52145800 | Weak transcription | Liver | Liver |
29 | chr15:52136000-52155200 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
30 | chr15:52136200-52155000 | Weak transcription | Aorta | Aorta |
31 | chr15:52136400-52138800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
32 | chr15:52136600-52138600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
33 | chr15:52136600-52138600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
34 | chr15:52136600-52138800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
35 | chr15:52136600-52153400 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
36 | chr15:52137000-52139600 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
37 | chr15:52137000-52139600 | Enhancers | Fetal Lung | lung |
38 | chr15:52137200-52138600 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
39 | chr15:52137200-52138600 | Enhancers | Primary T killer memory cells from peripheral blood | blood |
40 | chr15:52137200-52139000 | Enhancers | HSMM | muscle |
41 | chr15:52137200-52139200 | Enhancers | Skeletal Muscle Male | skeletal muscle |
42 | chr15:52137200-52139400 | Enhancers | Foreskin Fibroblast Primary Cells skin02 | Skin |
43 | chr15:52137200-52139400 | Enhancers | Duodenum Mucosa | Duodenum |
44 | chr15:52137200-52139400 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
45 | chr15:52137200-52139400 | Enhancers | Fetal Heart | heart |
46 | chr15:52137200-52139400 | Enhancers | Left Ventricle | heart |
47 | chr15:52137200-52139800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
48 | chr15:52137200-52140000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
49 | chr15:52137200-52140600 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
50 | chr15:52137200-52141600 | Enhancers | Primary T killer naive cells fromperipheralblood | blood |