Variant report
| Variant | rs2593177 |
|---|---|
| Chromosome Location | chr15:52206681-52206682 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52156000-52211000 | Weak transcription | Brain Substantia Nigra | brain |
| 2 | chr15:52167200-52210800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 3 | chr15:52171000-52210800 | Weak transcription | Right Ventricle | heart |
| 4 | chr15:52172800-52208200 | Weak transcription | Brain Angular Gyrus | brain |
| 5 | chr15:52177200-52213600 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 6 | chr15:52178800-52216600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 7 | chr15:52179600-52259800 | Strong transcription | Monocytes-CD14+_RO01746 | blood |
| 8 | chr15:52179800-52218600 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 9 | chr15:52180400-52218200 | Strong transcription | Primary T helper cells fromperipheralblood | blood |
| 10 | chr15:52181200-52221000 | Strong transcription | Primary monocytes fromperipheralblood | blood |
| 11 | chr15:52183200-52223000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 12 | chr15:52186400-52219000 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 13 | chr15:52187800-52212000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 14 | chr15:52191000-52222800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 15 | chr15:52192800-52213600 | Weak transcription | Brain Cingulate Gyrus | brain |
| 16 | chr15:52193400-52208200 | Weak transcription | Esophagus | oesophagus |
| 17 | chr15:52193400-52209800 | Weak transcription | HSMMtube | muscle |
| 18 | chr15:52193400-52210800 | Weak transcription | Brain Germinal Matrix | brain |
| 19 | chr15:52193400-52227800 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 20 | chr15:52193400-52232800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 21 | chr15:52193600-52233600 | Weak transcription | Fetal Brain Male | brain |
| 22 | chr15:52193800-52210400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 23 | chr15:52193800-52216200 | Weak transcription | Brain Hippocampus Middle | brain |
| 24 | chr15:52194200-52228200 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 25 | chr15:52194200-52231600 | Weak transcription | Psoas Muscle | Psoas |
| 26 | chr15:52194400-52209400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 27 | chr15:52194400-52236800 | Weak transcription | Fetal Kidney | kidney |
| 28 | chr15:52194400-52239000 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 29 | chr15:52194600-52210600 | Weak transcription | Brain Anterior Caudate | brain |
| 30 | chr15:52194800-52210400 | Weak transcription | Fetal Brain Female | brain |
| 31 | chr15:52196200-52234000 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 32 | chr15:52197000-52209000 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 33 | chr15:52197000-52234200 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 34 | chr15:52197000-52234800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 35 | chr15:52197200-52208000 | Weak transcription | Spleen | Spleen |
| 36 | chr15:52197600-52209000 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 37 | chr15:52197600-52210800 | Weak transcription | Small Intestine | intestine |
| 38 | chr15:52198400-52219000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 39 | chr15:52200000-52213800 | Weak transcription | NHLF | lung |
| 40 | chr15:52200200-52210800 | Weak transcription | Pancreas | Pancrea |
| 41 | chr15:52200200-52213000 | Weak transcription | Gastric | stomach |
| 42 | chr15:52200400-52213600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 43 | chr15:52200400-52220800 | Strong transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 44 | chr15:52200400-52262200 | Weak transcription | Stomach Mucosa | stomach |
| 45 | chr15:52200600-52206800 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 46 | chr15:52200600-52210600 | Weak transcription | Aorta | Aorta |
| 47 | chr15:52200600-52213600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 48 | chr15:52200600-52213600 | Weak transcription | HUVEC | blood vessel |
| 49 | chr15:52200800-52207000 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 50 | chr15:52200800-52209800 | Weak transcription | K562 | blood |
