Variant report
| Variant | rs2570240 |
|---|---|
| Chromosome Location | chr15:52132454-52132455 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:52123000-52134000 | Weak transcription | Pancreas | Pancrea |
| 2 | chr15:52123400-52133600 | Weak transcription | Colonic Mucosa | Colon |
| 3 | chr15:52123600-52140000 | Enhancers | Primary T helper cells fromperipheralblood | blood |
| 4 | chr15:52124200-52134600 | Weak transcription | HSMM | muscle |
| 5 | chr15:52124200-52134800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 6 | chr15:52124200-52135000 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 7 | chr15:52124200-52135000 | Weak transcription | Aorta | Aorta |
| 8 | chr15:52124200-52135400 | Weak transcription | Thymus | Thymus |
| 9 | chr15:52125000-52137600 | Weak transcription | Lung | lung |
| 10 | chr15:52129000-52136000 | Enhancers | Fetal Lung | lung |
| 11 | chr15:52129000-52136600 | Enhancers | Primary T regulatory cells fromperipheralblood | blood |
| 12 | chr15:52129000-52140200 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 13 | chr15:52129200-52139800 | Enhancers | Primary T helper cells PMA-I stimulated | -- |
| 14 | chr15:52129400-52140000 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 15 | chr15:52130000-52133000 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 16 | chr15:52130000-52133200 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 17 | chr15:52130000-52155000 | Weak transcription | Fetal Muscle Trunk | muscle |
| 18 | chr15:52130200-52133200 | Weak transcription | Fetal Intestine Small | intestine |
| 19 | chr15:52130200-52133600 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 20 | chr15:52130200-52134400 | Weak transcription | Brain Hippocampus Middle | brain |
| 21 | chr15:52130200-52134600 | Weak transcription | Psoas Muscle | Psoas |
| 22 | chr15:52130200-52135000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 23 | chr15:52130400-52133000 | Weak transcription | NHDF-Ad | bronchial |
| 24 | chr15:52130400-52133200 | Weak transcription | Fetal Intestine Large | intestine |
| 25 | chr15:52130400-52133600 | Weak transcription | HMEC | breast |
| 26 | chr15:52130400-52134400 | Weak transcription | NH-A | brain |
| 27 | chr15:52130400-52134600 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
| 28 | chr15:52130400-52134600 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 29 | chr15:52130400-52134600 | Weak transcription | HSMMtube | muscle |
| 30 | chr15:52130400-52134800 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 31 | chr15:52130400-52134800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 32 | chr15:52130400-52134800 | Weak transcription | Osteobl | bone |
| 33 | chr15:52130400-52135000 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 34 | chr15:52130400-52135000 | Weak transcription | Brain Substantia Nigra | brain |
| 35 | chr15:52130400-52135200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 36 | chr15:52130400-52137000 | Weak transcription | Brain Cingulate Gyrus | brain |
| 37 | chr15:52130400-52137600 | Weak transcription | Placenta | Placenta |
| 38 | chr15:52130600-52133000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 39 | chr15:52130600-52133600 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 40 | chr15:52130600-52133600 | Enhancers | Primary neutrophils fromperipheralblood | blood |
| 41 | chr15:52130600-52133600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 42 | chr15:52130600-52134800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 43 | chr15:52130600-52134800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 44 | chr15:52130600-52134800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 45 | chr15:52130600-52135000 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 46 | chr15:52130600-52135600 | Weak transcription | Brain Anterior Caudate | brain |
| 47 | chr15:52130600-52136200 | Enhancers | Primary T helper naive cells fromperipheralblood | blood |
| 48 | chr15:52130800-52133000 | Weak transcription | Hela-S3 | cervix |
| 49 | chr15:52130800-52133000 | Weak transcription | K562 | blood |
| 50 | chr15:52130800-52133600 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
