Variant report

Variant rs990665
Chromosome Location chr15:52188433-52188434
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52155600-52192000 Weak transcription Brain Inferior Temporal Lobe brain
2 chr15:52156000-52211000 Weak transcription Brain Substantia Nigra brain
3 chr15:52167200-52210800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr15:52167600-52192000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr15:52167600-52199600 Weak transcription ES-I3 Cell Line embryonic stem cell
6 chr15:52167800-52188600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr15:52168600-52188600 Weak transcription iPS-20b Cell Line embryonic stem cell
8 chr15:52171000-52210800 Weak transcription Right Ventricle heart
9 chr15:52171200-52190200 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr15:52172200-52190200 Weak transcription Fetal Heart heart
11 chr15:52172200-52192000 Weak transcription Fetal Brain Male brain
12 chr15:52172800-52208200 Weak transcription Brain Angular Gyrus brain
13 chr15:52176400-52188600 Weak transcription Small Intestine intestine
14 chr15:52176600-52189000 Weak transcription Placenta Amnion Placenta Amnion
15 chr15:52177000-52189800 Weak transcription Colonic Mucosa Colon
16 chr15:52177000-52192400 Weak transcription Brain Cingulate Gyrus brain
17 chr15:52177000-52192400 Weak transcription Gastric stomach
18 chr15:52177000-52192400 Weak transcription Rectal Smooth Muscle rectum
19 chr15:52177200-52188600 Weak transcription Brain Anterior Caudate brain
20 chr15:52177200-52192400 Weak transcription Psoas Muscle Psoas
21 chr15:52177200-52213600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr15:52177400-52188600 Weak transcription HSMMtube muscle
23 chr15:52177400-52188600 Weak transcription NHLF lung
24 chr15:52177400-52190000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr15:52178600-52192400 Weak transcription H1 Cell Line embryonic stem cell
26 chr15:52178800-52192400 Weak transcription Spleen Spleen
27 chr15:52178800-52216600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr15:52179000-52192400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr15:52179000-52196400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr15:52179000-52196600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
31 chr15:52179000-52196600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr15:52179600-52203800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
33 chr15:52179600-52259800 Strong transcription Monocytes-CD14+_RO01746 blood
34 chr15:52179800-52196000 Strong transcription HSMM muscle
35 chr15:52179800-52197200 Strong transcription Primary T helper cells PMA-I stimulated --
36 chr15:52179800-52197400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr15:52179800-52201600 Strong transcription Primary neutrophils fromperipheralblood blood
38 chr15:52179800-52218600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr15:52180000-52197400 Strong transcription Rectal Mucosa Donor 31 rectum
40 chr15:52180200-52199400 Strong transcription NHEK skin
41 chr15:52180400-52218200 Strong transcription Primary T helper cells fromperipheralblood blood
42 chr15:52180800-52188600 Weak transcription K562 blood
43 chr15:52180800-52191400 Weak transcription Pancreas Pancrea
44 chr15:52181200-52221000 Strong transcription Primary monocytes fromperipheralblood blood
45 chr15:52181400-52197000 Strong transcription Primary B cells from peripheral blood blood
46 chr15:52181600-52190200 Weak transcription Brain Hippocampus Middle brain
47 chr15:52181600-52196200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr15:52181600-52196200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
49 chr15:52181600-52197400 Strong transcription Duodenum Mucosa Duodenum
50 chr15:52181600-52197600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

Quick Search:


  
Input of quick search could be:

what's new

Quick links