Variant report

Variant rs2912188
Chromosome Location chr15:52234845-52234846
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52179600-52259800 Strong transcription Monocytes-CD14+_RO01746 blood
2 chr15:52194400-52236800 Weak transcription Fetal Kidney kidney
3 chr15:52194400-52239000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr15:52200400-52262200 Weak transcription Stomach Mucosa stomach
5 chr15:52201000-52238800 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr15:52204800-52238800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
7 chr15:52210000-52239000 Weak transcription Colon Smooth Muscle Colon
8 chr15:52211600-52237600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr15:52211600-52239200 Weak transcription Right Ventricle heart
10 chr15:52212400-52241600 Weak transcription Small Intestine intestine
11 chr15:52216000-52238600 Weak transcription Pancreas Pancrea
12 chr15:52217200-52238400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr15:52217200-52238800 Weak transcription Brain Angular Gyrus brain
14 chr15:52217600-52238800 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr15:52217800-52237400 Weak transcription Aorta Aorta
16 chr15:52217800-52237400 Weak transcription Brain Anterior Caudate brain
17 chr15:52217800-52239000 Weak transcription Gastric stomach
18 chr15:52218000-52243200 Weak transcription Fetal Heart heart
19 chr15:52222600-52259800 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr15:52222800-52236200 Strong transcription Fetal Stomach stomach
21 chr15:52223200-52245400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr15:52224000-52237400 Weak transcription iPS-15b Cell Line embryonic stem cell
23 chr15:52224200-52237200 Weak transcription Brain Cingulate Gyrus brain
24 chr15:52226000-52255200 Strong transcription Breast Myoepithelial Primary Cells Breast
25 chr15:52226200-52242600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
26 chr15:52226200-52254800 Strong transcription Thymus Thymus
27 chr15:52226200-52255000 Strong transcription Primary T cells fromperipheralblood blood
28 chr15:52226200-52259400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr15:52226800-52237200 Weak transcription Spleen Spleen
30 chr15:52227000-52235600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
31 chr15:52227400-52255000 Strong transcription Liver Liver
32 chr15:52227400-52258400 Strong transcription Dnd41 blood
33 chr15:52227600-52235000 Strong transcription Primary T regulatory cells fromperipheralblood blood
34 chr15:52227800-52255000 Strong transcription Rectal Mucosa Donor 31 rectum
35 chr15:52228200-52235200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
36 chr15:52228400-52238400 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr15:52228600-52236400 Weak transcription Placenta Amnion Placenta Amnion
38 chr15:52229200-52237000 Weak transcription Brain Inferior Temporal Lobe brain
39 chr15:52229200-52238200 Weak transcription Brain Germinal Matrix brain
40 chr15:52229400-52249000 Strong transcription Cortex derived primary cultured neurospheres brain
41 chr15:52229800-52254200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr15:52230000-52235000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
43 chr15:52230000-52237400 Weak transcription Ovary ovary
44 chr15:52230200-52238600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr15:52230800-52236000 Weak transcription Fetal Lung lung
46 chr15:52230800-52237400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr15:52230800-52237600 Weak transcription Adipose Nuclei Adipose
48 chr15:52231000-52236200 Weak transcription iPS-18 Cell Line embryonic stem cell
49 chr15:52232000-52236000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr15:52232000-52236600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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