The 2.0 version of rSNPBase

Variant report

Variant rs2470599
Chromosome Location chr15:52183359-52183360
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52155600-52192000 Weak transcription Brain Inferior Temporal Lobe brain
2 chr15:52156000-52211000 Weak transcription Brain Substantia Nigra brain
3 chr15:52163000-52186800 Weak transcription Stomach Smooth Muscle stomach
4 chr15:52163200-52184200 Weak transcription Fetal Muscle Trunk muscle
5 chr15:52163400-52186200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr15:52165800-52183600 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr15:52167200-52186200 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr15:52167200-52210800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr15:52167600-52192000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr15:52167600-52199600 Weak transcription ES-I3 Cell Line embryonic stem cell
11 chr15:52167800-52188600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr15:52168600-52188600 Weak transcription iPS-20b Cell Line embryonic stem cell
13 chr15:52168800-52183800 Weak transcription Fetal Thymus thymus
14 chr15:52170400-52186400 Weak transcription Thymus Thymus
15 chr15:52170400-52186600 Weak transcription Skeletal Muscle Female skeletal muscle
16 chr15:52170600-52184800 Weak transcription Lung lung
17 chr15:52170600-52186000 Weak transcription Left Ventricle heart
18 chr15:52171000-52184400 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr15:52171000-52210800 Weak transcription Right Ventricle heart
20 chr15:52171200-52190200 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr15:52171600-52187000 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr15:52172200-52186000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
23 chr15:52172200-52186600 Weak transcription Fetal Kidney kidney
24 chr15:52172200-52190200 Weak transcription Fetal Heart heart
25 chr15:52172200-52192000 Weak transcription Fetal Brain Male brain
26 chr15:52172800-52208200 Weak transcription Brain Angular Gyrus brain
27 chr15:52173000-52184000 Weak transcription Stomach Mucosa stomach
28 chr15:52176400-52188600 Weak transcription Small Intestine intestine
29 chr15:52176600-52189000 Weak transcription Placenta Amnion Placenta Amnion
30 chr15:52177000-52184600 Weak transcription Colon Smooth Muscle Colon
31 chr15:52177000-52188200 Weak transcription Aorta Aorta
32 chr15:52177000-52189800 Weak transcription Colonic Mucosa Colon
33 chr15:52177000-52192400 Weak transcription Brain Cingulate Gyrus brain
34 chr15:52177000-52192400 Weak transcription Gastric stomach
35 chr15:52177000-52192400 Weak transcription Rectal Smooth Muscle rectum
36 chr15:52177200-52184200 Weak transcription Fetal Muscle Leg muscle
37 chr15:52177200-52188600 Weak transcription Brain Anterior Caudate brain
38 chr15:52177200-52192400 Weak transcription Psoas Muscle Psoas
39 chr15:52177200-52213600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr15:52177400-52183600 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr15:52177400-52186000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
42 chr15:52177400-52186200 Weak transcription Cortex derived primary cultured neurospheres brain
43 chr15:52177400-52187600 Weak transcription Ovary ovary
44 chr15:52177400-52188600 Weak transcription HSMMtube muscle
45 chr15:52177400-52188600 Weak transcription NHLF lung
46 chr15:52177400-52190000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr15:52177600-52186000 Weak transcription HUES48 Cell Line embryonic stem cell
48 chr15:52178400-52184600 Weak transcription Fetal Stomach stomach
49 chr15:52178600-52192400 Weak transcription H1 Cell Line embryonic stem cell
50 chr15:52178800-52192400 Weak transcription Spleen Spleen

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Last update: Aug 31, 2015