Variant report

Variant rs12903500
Chromosome Location chr15:52043327-52043328
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:52042600-52043400 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
2 chr15:52042600-52043600 Flanking Active TSS GM12878-XiMat blood
3 chr15:52042800-52043400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
4 chr15:52042800-52043400 Flanking Active TSS Rectal Mucosa Donor 29 rectum
5 chr15:52042800-52043600 Flanking Active TSS Brain Inferior Temporal Lobe brain
6 chr15:52042800-52043600 Flanking Active TSS K562 blood
7 chr15:52042800-52044600 Bivalent/Poised TSS HUES6 Cell Line embryonic stem cell
8 chr15:52042800-52044600 Active TSS Brain Anterior Caudate brain
9 chr15:52042800-52044800 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
10 chr15:52043000-52043400 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
11 chr15:52043000-52043400 Bivalent/Poised TSS iPS DF 6.9 Cell Line embryonic stem cell
12 chr15:52043000-52043400 Bivalent/Poised TSS iPS DF 19.11 Cell Line embryonic stem cell
13 chr15:52043000-52043400 Flanking Active TSS Brain Cingulate Gyrus brain
14 chr15:52043000-52043400 Flanking Active TSS Brain Hippocampus Middle brain
15 chr15:52043000-52043400 Flanking Active TSS Colon Smooth Muscle Colon
16 chr15:52043000-52043400 Flanking Active TSS Duodenum Smooth Muscle Duodenum
17 chr15:52043000-52043400 Bivalent/Poised TSS Fetal Brain Male brain
18 chr15:52043000-52043400 Enhancers Sigmoid Colon Sigmoid Colon
19 chr15:52043000-52043400 Enhancers Small Intestine intestine
20 chr15:52043000-52043400 Enhancers Spleen Spleen
21 chr15:52043000-52043400 Bivalent Enhancer Dnd41 blood
22 chr15:52043000-52043600 Flanking Active TSS Primary B cells from peripheral blood blood
23 chr15:52043000-52043600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
24 chr15:52043000-52043600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr15:52043000-52043600 Bivalent/Poised TSS Fetal Kidney kidney
26 chr15:52043000-52043600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
27 chr15:52043000-52044400 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
28 chr15:52043000-52044600 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
29 chr15:52043000-52044600 Active TSS Brain Substantia Nigra brain
30 chr15:52043000-52044600 Active TSS Rectal Smooth Muscle rectum
31 chr15:52043000-52044800 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
32 chr15:52043000-52044800 Bivalent/Poised TSS H1 Cell Line embryonic stem cell
33 chr15:52043000-52045200 Active TSS Pancreatic Islets Pancreatic Islet
34 chr15:52043200-52043400 Flanking Bivalent TSS/Enh H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr15:52043200-52043400 Bivalent Enhancer H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr15:52043200-52043400 Bivalent/Poised TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr15:52043200-52043400 Bivalent/Poised TSS ES-UCSF4 Cell Line embryonic stem cell
38 chr15:52043200-52043400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr15:52043200-52043400 Bivalent/Poised TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr15:52043200-52043400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
41 chr15:52043200-52043400 Bivalent Enhancer Primary monocytes fromperipheralblood blood
42 chr15:52043200-52043400 Flanking Bivalent TSS/Enh Primary neutrophils fromperipheralblood blood
43 chr15:52043200-52043400 Flanking Active TSS Primary T cells from cord blood blood
44 chr15:52043200-52043400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells short term culture blood
45 chr15:52043200-52043400 Flanking Bivalent TSS/Enh Primary Natural Killer cells fromperipheralblood blood
46 chr15:52043200-52043400 Flanking Bivalent TSS/Enh Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr15:52043200-52043400 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
48 chr15:52043200-52043400 Enhancers Liver Liver
49 chr15:52043200-52043400 Flanking Active TSS Brain Angular Gyrus brain
50 chr15:52043200-52043400 Flanking Bivalent TSS/Enh Fetal Brain Female brain

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