Variant report

Variant	rs2618084
Chromosome Location	chr11:76029879-76029880
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:17)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

No data

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:75918308..75919483-chr11:76029559..76030293,4	MCF-7	breast:
2	chr11:75578959..75579490-chr11:76029607..76030437,2	MCF-7	breast:
3	chr11:75862929..75863882-chr11:76029395..76030079,4	K562	blood:
4	chr11:75919537..75920594-chr11:76028825..76030444,6	MCF-7	breast:
5	chr11:76029598..76030351-chr3:64009140..64009722,2	MCF-7	breast:
6	chr11:75513939..75514494-chr11:76029429..76030070,2	K562	blood:
7	chr11:75918322..75919263-chr11:76029385..76030419,7	MCF-7	breast:
8	chr11:75918335..75919414-chr11:76029518..76030460,11	K562	blood:
9	chr11:75864249..75865220-chr11:76029478..76030050,2	MCF-7	breast:
10	chr11:75857248..75857816-chr11:76029548..76030103,2	K562	blood:
11	chr11:75919338..75920436-chr11:76029517..76030609,7	MCF-7	breast:
12	chr11:76025405..76027275-chr11:76028551..76031168,2	MCF-7	breast:
13	chr11:75514094..75514982-chr11:76029520..76030024,2	MCF-7	breast:
14	chr11:75607508..75608561-chr11:76029521..76030484,5	K562	blood:
15	chr11:75918736..75920705-chr11:76028307..76032444,3	MCF-7	breast:
16	chr11:75919626..75920483-chr11:76029554..76030079,2	K562	blood:
17	chr11:75607614..75608274-chr11:76029558..76030238,2	MCF-7	breast:

No data

No data

No data

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs2618089	0.84[EUR][1000 genomes]
rs2618091	0.85[EUR][1000 genomes]
rs2851155	0.84[EUR][1000 genomes]
rs2851466	0.84[EUR][1000 genomes]
rs2851467	0.84[EUR][1000 genomes]
rs736984	0.92[CEU][hapmap];0.84[EUR][1000 genomes]
rs745870	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv989053	chr11:76027846-76039082	Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS	Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76025800-76031200	Weak transcription	Placenta	Placenta
2	chr11:76027000-76032800	Weak transcription	Placenta Amnion	Placenta Amnion
3	chr11:76028400-76030600	Enhancers	Pancreas	Pancrea
4	chr11:76028800-76033400	Weak transcription	Hela-S3	cervix
5	chr11:76029600-76030200	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
6	chr11:76029600-76030200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
7	chr11:76029600-76030200	Enhancers	Skeletal Muscle Female	skeletal muscle
8	chr11:76029800-76030000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr11:76029800-76030000	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
10	chr11:76029800-76030000	Enhancers	Adipose Nuclei	Adipose
11	chr11:76029800-76030000	Enhancers	Brain Inferior Temporal Lobe	brain
12	chr11:76029800-76030000	Enhancers	Fetal Lung	lung
13	chr11:76029800-76030000	Enhancers	Gastric	stomach
14	chr11:76029800-76030000	Enhancers	Right Ventricle	heart
15	chr11:76029800-76030000	Bivalent Enhancer	Stomach Smooth Muscle	stomach
16	chr11:76029800-76030200	Bivalent Enhancer	Fetal Muscle Leg	muscle
17	chr11:76029800-76030200	Bivalent Enhancer	Skeletal Muscle Male	skeletal muscle
18	chr11:76029800-76032200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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