Variant report

Variant	rs2851155
Chromosome Location	chr11:76025070-76025071
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:76018771..76021180-chr11:76023775..76026508,2	MCF-7	breast:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs2618084	0.84[EUR][1000 genomes]
rs2618086	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2618089	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2618091	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2851466	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2851467	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs736984	0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs745870	0.82[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv897930	chr11:75960472-76027936	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Genic enhancers	Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:33 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:76020400-76026200	Enhancers	Fetal Lung	lung
2	chr11:76022400-76025200	Weak transcription	Adipose Nuclei	Adipose
3	chr11:76023000-76025200	Weak transcription	Fetal Brain Female	brain
4	chr11:76023800-76025400	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr11:76024000-76025400	Enhancers	Monocytes-CD14+_RO01746	blood
6	chr11:76024400-76025400	Enhancers	Primary neutrophils fromperipheralblood	blood
7	chr11:76024400-76027000	Enhancers	Placenta Amnion	Placenta Amnion
8	chr11:76024600-76025800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
9	chr11:76024600-76025800	Enhancers	Placenta	Placenta
10	chr11:76024800-76025200	Bivalent Enhancer	Fetal Stomach	stomach
11	chr11:76024800-76025800	Bivalent Enhancer	ES-WA7 Cell Line	embryonic stem cell
12	chr11:76024800-76025800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
13	chr11:76024800-76025800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
14	chr11:76024800-76026000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
15	chr11:76024800-76026000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
16	chr11:76024800-76026000	Bivalent Enhancer	Fetal Muscle Leg	muscle
17	chr11:76024800-76026800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr11:76025000-76025200	Bivalent Enhancer	H1 Cell Line	embryonic stem cell
19	chr11:76025000-76025200	Bivalent Enhancer	HUES48 Cell Line	embryonic stem cell
20	chr11:76025000-76025200	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr11:76025000-76025200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr11:76025000-76025200	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
23	chr11:76025000-76025200	Bivalent Enhancer	Colonic Mucosa	Colon
24	chr11:76025000-76025200	Bivalent Enhancer	K562	blood
25	chr11:76025000-76025400	Enhancers	H9 Cell Line	embryonic stem cell
26	chr11:76025000-76025600	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
27	chr11:76025000-76025800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr11:76025000-76025800	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
29	chr11:76025000-76025800	Bivalent Enhancer	HSMMtube	muscle
30	chr11:76025000-76026600	Enhancers	ES-I3 Cell Line	embryonic stem cell
31	chr11:76025000-76026800	Bivalent Enhancer	H1 Derived Mesenchymal Stem Cells	ES cell derived
32	chr11:76025000-76027000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
33	chr11:76025000-76027000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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