The 2.0 version of rSNPBase

Variant report

Variant rs262926
Chromosome Location chr6:37141346-37141347
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37138000-37143200 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
2 chr6:37138200-37142000 Flanking Active TSS Primary hematopoietic stem cells blood
3 chr6:37138200-37143400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
4 chr6:37138200-37143400 Transcr. at gene 5' and 3' Dnd41 blood
5 chr6:37138200-37143800 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
6 chr6:37138200-37144000 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
7 chr6:37138600-37143600 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr6:37138600-37144400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
9 chr6:37138800-37141800 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
10 chr6:37138800-37142800 Transcr. at gene 5' and 3' Primary neutrophils fromperipheralblood blood
11 chr6:37138800-37144000 Transcr. at gene 5' and 3' Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr6:37138800-37145000 Transcr. at gene 5' and 3' K562 blood
13 chr6:37139000-37141400 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr6:37139000-37143200 Transcr. at gene 5' and 3' Primary T cells fromperipheralblood blood
15 chr6:37139000-37143600 Transcr. at gene 5' and 3' Primary T killer memory cells from peripheral blood blood
16 chr6:37139800-37143200 Transcr. at gene 5' and 3' Duodenum Smooth Muscle Duodenum
17 chr6:37140000-37144000 Weak transcription HSMM muscle
18 chr6:37140200-37141400 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr6:37140200-37141400 Transcr. at gene 5' and 3' Rectal Smooth Muscle rectum
20 chr6:37140200-37142400 Transcr. at gene 5' and 3' HepG2 liver
21 chr6:37140200-37142600 Transcr. at gene 5' and 3' Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr6:37140200-37142600 Transcr. at gene 5' and 3' Primary T killer naive cells fromperipheralblood blood
23 chr6:37140200-37142600 Transcr. at gene 5' and 3' Duodenum Mucosa Duodenum
24 chr6:37140200-37143000 Transcr. at gene 5' and 3' Esophagus oesophagus
25 chr6:37140200-37143200 Transcr. at gene 5' and 3' Primary mononuclear cells fromperipheralblood Blood
26 chr6:37140200-37143600 Transcr. at gene 5' and 3' Primary T cells effector/memory enriched fromperipheralblood blood
27 chr6:37140200-37143600 Transcr. at gene 5' and 3' Primary Natural Killer cells fromperipheralblood blood
28 chr6:37140200-37143800 Transcr. at gene 5' and 3' Primary T helper naive cells from peripheral blood blood
29 chr6:37140400-37141400 Transcr. at gene 5' and 3' Stomach Smooth Muscle stomach
30 chr6:37140400-37141600 Enhancers Fetal Heart heart
31 chr6:37140400-37141800 Transcr. at gene 5' and 3' Brain Hippocampus Middle brain
32 chr6:37140400-37142600 Transcr. at gene 5' and 3' Adipose Nuclei Adipose
33 chr6:37140400-37142600 Strong transcription Fetal Kidney kidney
34 chr6:37140400-37142600 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
35 chr6:37140400-37143000 Strong transcription Aorta Aorta
36 chr6:37140400-37143200 Strong transcription H9 Cell Line embryonic stem cell
37 chr6:37140400-37143200 Transcr. at gene 5' and 3' Primary T cells from cord blood blood
38 chr6:37140400-37143400 Genic enhancers Primary B cells from peripheral blood blood
39 chr6:37140400-37143400 Transcr. at gene 5' and 3' Primary T helper memory cells from peripheral blood 2 blood
40 chr6:37140400-37143400 Transcr. at gene 5' and 3' Primary T helper cells fromperipheralblood blood
41 chr6:37140600-37141600 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
42 chr6:37140600-37141800 Genic enhancers iPS-20b Cell Line embryonic stem cell
43 chr6:37140600-37141800 Genic enhancers iPS DF 6.9 Cell Line embryonic stem cell
44 chr6:37140600-37141800 Weak transcription Psoas Muscle Psoas
45 chr6:37140600-37141800 Genic enhancers Stomach Mucosa stomach
46 chr6:37140600-37142000 Genic enhancers Fetal Muscle Leg muscle
47 chr6:37140600-37142000 Genic enhancers Spleen Spleen
48 chr6:37140600-37142600 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
49 chr6:37140600-37142600 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr6:37140600-37142600 Genic enhancers Breast Myoepithelial Primary Cells Breast

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015