The 2.0 version of rSNPBase

Variant report

Variant rs262930
Chromosome Location chr6:37144886-37144887
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:37138800-37145000 Transcr. at gene 5' and 3' K562 blood
2 chr6:37141000-37165000 Weak transcription Right Atrium heart
3 chr6:37141600-37145200 Weak transcription Fetal Brain Male brain
4 chr6:37142600-37145000 Weak transcription Fetal Kidney kidney
5 chr6:37142600-37145200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:37142600-37145200 Weak transcription Brain Angular Gyrus brain
7 chr6:37142600-37145200 Weak transcription Brain Anterior Caudate brain
8 chr6:37142600-37145400 Weak transcription Hela-S3 cervix
9 chr6:37142600-37159600 Weak transcription Fetal Heart heart
10 chr6:37142800-37145000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr6:37142800-37145000 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr6:37142800-37145000 Weak transcription HSMMtube muscle
13 chr6:37143000-37145200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr6:37143000-37147800 Weak transcription Colonic Mucosa Colon
15 chr6:37143200-37145200 Weak transcription Brain Germinal Matrix brain
16 chr6:37143200-37145200 Weak transcription Small Intestine intestine
17 chr6:37143200-37146000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
18 chr6:37143200-37146800 Enhancers Primary hematopoietic stem cells blood
19 chr6:37143200-37147000 Weak transcription Skeletal Muscle Female skeletal muscle
20 chr6:37143200-37148000 Weak transcription H9 Cell Line embryonic stem cell
21 chr6:37143200-37150600 Weak transcription Gastric stomach
22 chr6:37143200-37153000 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr6:37143400-37145000 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
24 chr6:37143400-37145000 Weak transcription Ovary ovary
25 chr6:37143400-37145200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr6:37143400-37145200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr6:37143400-37145800 Enhancers Primary T cells from cord blood blood
28 chr6:37143400-37146000 Weak transcription Left Ventricle heart
29 chr6:37143400-37146200 Enhancers Primary B cells from peripheral blood blood
30 chr6:37143400-37150400 Weak transcription Lung lung
31 chr6:37143400-37150600 Weak transcription Thymus Thymus
32 chr6:37143400-37150600 Weak transcription HepG2 liver
33 chr6:37143400-37155200 Weak transcription H1 Cell Line embryonic stem cell
34 chr6:37143400-37159600 Weak transcription Placenta Amnion Placenta Amnion
35 chr6:37143600-37145000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
36 chr6:37143600-37145000 Weak transcription Duodenum Mucosa Duodenum
37 chr6:37143600-37145200 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr6:37143600-37145200 Weak transcription Right Ventricle heart
39 chr6:37143600-37145200 Weak transcription NHEK skin
40 chr6:37143600-37145400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:37143600-37145400 Weak transcription NHLF lung
42 chr6:37143600-37145600 Weak transcription HUVEC blood vessel
43 chr6:37143600-37145600 Weak transcription NHDF-Ad bronchial
44 chr6:37143600-37145800 Enhancers GM12878-XiMat blood
45 chr6:37143600-37146200 Enhancers Primary monocytes fromperipheralblood blood
46 chr6:37143600-37146400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
47 chr6:37143600-37150600 Weak transcription Liver Liver
48 chr6:37143600-37150600 Weak transcription Fetal Muscle Trunk muscle
49 chr6:37143600-37150800 Weak transcription Stomach Smooth Muscle stomach
50 chr6:37143600-37151200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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Last update: Aug 31, 2015