Variant report

Variant	rs262934
Chromosome Location	chr6:37134632-37134633
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOXA1	chr6:37134206-37134736	HepG2	liver:	n/a	chr6:37134434-37134446
2	FOXA1	chr6:37134244-37134717	HepG2	liver:	n/a	chr6:37134434-37134446

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:37081460..37084312-chr6:37132891..37135364,2	K562	blood:
2	chr6:37127696..37130193-chr6:37133679..37136120,2	K562	blood:

Variant related genes	Relation type
PIM1	TF binding region

rs_ID	r²[population]
rs262926	1.00[AFR][1000 genomes]
rs262930	1.00[AFR][1000 genomes]
rs262937	0.94[AFR][1000 genomes]
rs2788080	1.00[AFR][1000 genomes]

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37110400-37136800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:37112800-37136000	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr6:37118000-37136600	Weak transcription	Right Atrium	heart
4	chr6:37123600-37137000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
5	chr6:37125400-37136000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr6:37129000-37136000	Weak transcription	Fetal Intestine Small	intestine
7	chr6:37129000-37137200	Weak transcription	Small Intestine	intestine
8	chr6:37129200-37136000	Weak transcription	Duodenum Mucosa	Duodenum
9	chr6:37129200-37136600	Weak transcription	Rectal Mucosa Donor 29	rectum
10	chr6:37129400-37136000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr6:37129400-37136600	Weak transcription	Liver	Liver
12	chr6:37129600-37136000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr6:37130400-37136000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
14	chr6:37131400-37135800	Weak transcription	HUES6 Cell Line	embryonic stem cell
15	chr6:37131400-37136000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
16	chr6:37131800-37135800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
17	chr6:37132800-37135800	Weak transcription	K562	blood
18	chr6:37132800-37136000	Weak transcription	Hela-S3	cervix
19	chr6:37132800-37136200	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
20	chr6:37132800-37136600	Weak transcription	Colonic Mucosa	Colon
21	chr6:37132800-37136600	Weak transcription	GM12878-XiMat	blood
22	chr6:37133000-37136600	Weak transcription	Primary T cells fromperipheralblood	blood
23	chr6:37133400-37136000	Weak transcription	Placenta	Placenta
24	chr6:37133400-37136600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
25	chr6:37133400-37136800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
26	chr6:37134000-37136600	Enhancers	HepG2	liver
27	chr6:37134200-37136400	Weak transcription	Fetal Intestine Large	intestine
28	chr6:37134400-37135800	Weak transcription	HUES64 Cell Line	embryonic stem cell
29	chr6:37134600-37135800	Weak transcription	HUES48 Cell Line	embryonic stem cell
30	chr6:37134600-37136000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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