The 2.0 version of rSNPBase

Variant report

Variant rs263974
Chromosome Location chr1:45358131-45358132
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:45309200-45360600 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:45313400-45360200 Weak transcription Hela-S3 cervix
3 chr1:45322600-45360000 Weak transcription Small Intestine intestine
4 chr1:45334600-45371800 Weak transcription Gastric stomach
5 chr1:45340800-45361800 Weak transcription Aorta Aorta
6 chr1:45345600-45366200 Weak transcription Esophagus oesophagus
7 chr1:45345800-45363600 Weak transcription Colonic Mucosa Colon
8 chr1:45346200-45359200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:45346400-45363200 Weak transcription Primary T killer memory cells from peripheral blood blood
10 chr1:45347600-45358800 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr1:45347600-45360400 Weak transcription HMEC breast
12 chr1:45347600-45362600 Weak transcription Lung lung
13 chr1:45347600-45410800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr1:45348000-45360000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:45349600-45358400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr1:45349600-45360000 Weak transcription Muscle Satellite Cultured Cells --
17 chr1:45350600-45360600 Weak transcription Rectal Smooth Muscle rectum
18 chr1:45350600-45361200 Weak transcription Stomach Smooth Muscle stomach
19 chr1:45350800-45363200 Weak transcription Right Ventricle heart
20 chr1:45350800-45363400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:45350800-45364200 Weak transcription Colon Smooth Muscle Colon
22 chr1:45350800-45369000 Weak transcription Brain Angular Gyrus brain
23 chr1:45350800-45382400 Weak transcription Pancreas Pancrea
24 chr1:45350800-45411800 Weak transcription Left Ventricle heart
25 chr1:45351400-45358200 ZNF genes & repeats Fetal Intestine Small intestine
26 chr1:45351800-45358600 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:45352000-45358200 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
28 chr1:45352200-45358200 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:45352400-45358200 ZNF genes & repeats Primary hematopoietic stem cells blood
30 chr1:45352600-45360400 Weak transcription Ovary ovary
31 chr1:45353000-45374000 Weak transcription Fetal Heart heart
32 chr1:45354800-45358400 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr1:45354800-45359600 Weak transcription Osteobl bone
34 chr1:45354800-45360000 Weak transcription NHEK skin
35 chr1:45355200-45366400 Weak transcription Psoas Muscle Psoas
36 chr1:45355600-45368200 Weak transcription Fetal Stomach stomach
37 chr1:45355800-45360000 Weak transcription HUVEC blood vessel
38 chr1:45355800-45363800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
39 chr1:45355800-45369000 Weak transcription Brain Cingulate Gyrus brain
40 chr1:45355800-45411200 Weak transcription Fetal Lung lung
41 chr1:45356000-45359200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
42 chr1:45356000-45360000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr1:45356000-45363600 Weak transcription Rectal Mucosa Donor 31 rectum
44 chr1:45356000-45369000 Weak transcription Brain Hippocampus Middle brain
45 chr1:45356000-45373000 Weak transcription Brain Anterior Caudate brain
46 chr1:45356000-45407000 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr1:45356000-45423800 Weak transcription Thymus Thymus
48 chr1:45356200-45358400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
49 chr1:45356400-45390600 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr1:45356600-45358800 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015