Variant report

Variant	rs2699028
Chromosome Location	chr4:160349813-160349814
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10517700	0.86[EUR][1000 genomes]
rs2016804	0.86[EUR][1000 genomes]
rs2463987	0.86[AFR][1000 genomes]
rs2699017	0.84[AFR][1000 genomes]
rs2699029	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2699031	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2707662	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2707663	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2707700	0.87[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2952608	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs3805139	1.00[MEX][hapmap]
rs4083283	0.86[EUR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:160347600-160351000	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr4:160347600-160356800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr4:160347800-160350200	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr4:160348600-160350200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr4:160348800-160350000	Enhancers	Skeletal Muscle Male	skeletal muscle
6	chr4:160348800-160350200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr4:160348800-160351200	Enhancers	Fetal Heart	heart
8	chr4:160349000-160350200	Weak transcription	HUES6 Cell Line	embryonic stem cell
9	chr4:160349000-160350200	Weak transcription	Left Ventricle	heart
10	chr4:160349000-160350800	Enhancers	Fetal Muscle Leg	muscle
11	chr4:160349000-160356600	Weak transcription	HepG2	liver
12	chr4:160349200-160350400	Weak transcription	Right Atrium	heart
13	chr4:160349200-160355800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
14	chr4:160349400-160350600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr4:160349600-160350800	Enhancers	HSMMtube	muscle
16	chr4:160349800-160350000	Enhancers	Skeletal Muscle Female	skeletal muscle
17	chr4:160349800-160350400	Enhancers	Right Ventricle	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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