Variant report

Variant	rs2707662
Chromosome Location	chr4:160350820-160350821
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10517700	0.86[EUR][1000 genomes]
rs2016804	0.86[EUR][1000 genomes]
rs2463987	0.85[AFR][1000 genomes]
rs2699017	0.83[AFR][1000 genomes]
rs2699028	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2699029	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2699031	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2707663	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2707700	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2952608	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4083283	0.86[EUR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:160347600-160351000	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr4:160347600-160356800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr4:160348800-160351200	Enhancers	Fetal Heart	heart
4	chr4:160349000-160356600	Weak transcription	HepG2	liver
5	chr4:160349200-160355800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr4:160350200-160351200	Enhancers	HUVEC	blood vessel
7	chr4:160350200-160351200	Enhancers	NHEK	skin
8	chr4:160350400-160351000	Enhancers	Adipose Nuclei	Adipose
9	chr4:160350400-160351400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr4:160350400-160351400	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Male	--
11	chr4:160350400-160351600	Enhancers	Primary hematopoietic stem cells	blood
12	chr4:160350600-160367800	Weak transcription	HSMM	muscle
13	chr4:160350800-160351000	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr4:160350800-160354600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr4:160350800-160355400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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