Variant report

Variant rs2709827
Chromosome Location chr4:152331252-152331253
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:152328600-152331400 Active TSS HUES48 Cell Line embryonic stem cell
2 chr4:152328800-152331600 Active TSS ES-WA7 Cell Line embryonic stem cell
3 chr4:152328800-152332000 Active TSS H9 Cell Line embryonic stem cell
4 chr4:152329000-152331400 Active TSS iPS-15b Cell Line embryonic stem cell
5 chr4:152329000-152331400 Active TSS Fetal Kidney kidney
6 chr4:152329000-152331600 Active TSS Gastric stomach
7 chr4:152329000-152331800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
8 chr4:152329000-152331800 Active TSS Duodenum Smooth Muscle Duodenum
9 chr4:152329000-152331800 Active TSS Esophagus oesophagus
10 chr4:152329000-152332000 Active TSS Pancreatic Islets Pancreatic Islet
11 chr4:152329000-152333000 Active TSS Breast Myoepithelial Primary Cells Breast
12 chr4:152329200-152331400 Active TSS Psoas Muscle Psoas
13 chr4:152329200-152331600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr4:152329400-152332200 Active TSS ES-I3 Cell Line embryonic stem cell
15 chr4:152329600-152331400 Active TSS iPS-18 Cell Line embryonic stem cell
16 chr4:152329600-152331400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr4:152329600-152331400 Active TSS Rectal Mucosa Donor 29 rectum
18 chr4:152329600-152331600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr4:152329600-152331600 Active TSS ES-UCSF4 Cell Line embryonic stem cell
20 chr4:152329600-152331600 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr4:152329600-152331600 Active TSS Left Ventricle heart
22 chr4:152329600-152331800 Active TSS Pancreas Pancrea
23 chr4:152329600-152331800 Active TSS Right Ventricle heart
24 chr4:152329600-152332200 Active TSS H1 Cell Line embryonic stem cell
25 chr4:152329800-152331400 Active TSS HMEC breast
26 chr4:152329800-152331400 Active TSS HSMM muscle
27 chr4:152329800-152331800 Active TSS Rectal Smooth Muscle rectum
28 chr4:152329800-152332000 Active TSS HUES64 Cell Line embryonic stem cell
29 chr4:152330000-152331600 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr4:152330200-152331400 Bivalent Enhancer Fetal Brain Male brain
31 chr4:152330400-152331400 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr4:152330600-152331400 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
33 chr4:152330600-152331400 Flanking Active TSS Brain Inferior Temporal Lobe brain
34 chr4:152330600-152331600 Flanking Bivalent TSS/Enh Fetal Brain Female brain
35 chr4:152330600-152331600 Flanking Bivalent TSS/Enh Fetal Intestine Large intestine
36 chr4:152330600-152331600 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
37 chr4:152330800-152331400 Bivalent Enhancer Primary hematopoietic stem cells short term culture blood
38 chr4:152330800-152331400 Enhancers Primary T helper naive cells from peripheral blood blood
39 chr4:152330800-152331400 Flanking Active TSS Brain Anterior Caudate brain
40 chr4:152330800-152331400 Flanking Active TSS Brain Substantia Nigra brain
41 chr4:152330800-152331400 Active TSS Colonic Mucosa Colon
42 chr4:152330800-152331400 Bivalent/Poised TSS Thymus Thymus
43 chr4:152330800-152331600 Flanking Active TSS Liver Liver
44 chr4:152330800-152331600 Flanking Active TSS Skeletal Muscle Female skeletal muscle
45 chr4:152330800-152332200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
46 chr4:152331000-152331400 Flanking Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr4:152331000-152331400 Flanking Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr4:152331000-152331400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
49 chr4:152331000-152331400 Bivalent Enhancer Primary T cells fromperipheralblood blood
50 chr4:152331000-152331400 Enhancers Primary T helper cells fromperipheralblood blood

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