Variant report

Variant rs2709828
Chromosome Location chr4:152355268-152355269
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:27 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:152338400-152362000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr4:152349000-152356600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr4:152349400-152356400 Enhancers Breast Myoepithelial Primary Cells Breast
4 chr4:152351200-152356600 Enhancers HMEC breast
5 chr4:152352000-152356200 Weak transcription Fetal Heart heart
6 chr4:152352000-152357200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr4:152352400-152355400 Weak transcription NH-A brain
8 chr4:152352600-152358800 Weak transcription Stomach Mucosa stomach
9 chr4:152352800-152355800 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr4:152352800-152356600 Enhancers NHEK skin
11 chr4:152354000-152359200 Weak transcription Sigmoid Colon Sigmoid Colon
12 chr4:152354200-152355800 Weak transcription Skeletal Muscle Female skeletal muscle
13 chr4:152354200-152357200 Weak transcription Small Intestine intestine
14 chr4:152354400-152357200 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr4:152354400-152357200 Weak transcription iPS-20b Cell Line embryonic stem cell
16 chr4:152354400-152359400 Weak transcription Pancreas Pancrea
17 chr4:152354400-152364200 Weak transcription H1 Cell Line embryonic stem cell
18 chr4:152354600-152355800 Weak transcription Placenta Amnion Placenta Amnion
19 chr4:152354800-152356400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr4:152354800-152364200 Weak transcription H9 Cell Line embryonic stem cell
21 chr4:152355000-152356000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr4:152355000-152356400 Enhancers Hela-S3 cervix
23 chr4:152355000-152357200 Enhancers Muscle Satellite Cultured Cells --
24 chr4:152355000-152357200 Enhancers HSMM muscle
25 chr4:152355200-152356000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr4:152355200-152356400 Enhancers Osteobl bone
27 chr4:152355200-152357200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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