Variant report

Variant	rs2718814
Chromosome Location	chr3:133399205-133399206
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1550742	0.82[EUR][1000 genomes]
rs1867502	0.99[ASN][1000 genomes]
rs2589267	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2589274	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2589275	0.96[ASN][1000 genomes]
rs2718809	0.96[ASN][1000 genomes]
rs2718811	0.92[ASN][1000 genomes]
rs2718812	0.97[ASN][1000 genomes]
rs2718813	0.97[ASN][1000 genomes]
rs2718815	0.96[ASN][1000 genomes]
rs2953740	0.97[ASN][1000 genomes]
rs3192149	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35787332	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4359807	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4557155	0.96[ASN][1000 genomes]
rs4854741	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7626210	0.96[ASN][1000 genomes]
rs7628607	0.94[ASN][1000 genomes]
rs7632134	0.81[AMR][1000 genomes];0.82[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133393800-133406800	Weak transcription	Brain Substantia Nigra	brain
2	chr3:133394000-133399600	Weak transcription	Brain Inferior Temporal Lobe	brain

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links