Variant report

Variant	rs35787332
Chromosome Location	chr3:133405485-133405486
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs1550742	0.81[EUR][1000 genomes]
rs1867502	0.98[ASN][1000 genomes]
rs2589267	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2589274	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2589275	0.95[ASN][1000 genomes]
rs2718809	0.95[ASN][1000 genomes]
rs2718811	0.92[ASN][1000 genomes]
rs2718812	0.97[ASN][1000 genomes]
rs2718813	0.97[ASN][1000 genomes]
rs2718814	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2718815	0.95[ASN][1000 genomes]
rs2953740	0.97[ASN][1000 genomes]
rs3192149	0.83[AFR][1000 genomes];0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs4359807	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4557155	0.96[ASN][1000 genomes]
rs4854741	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7626210	0.95[ASN][1000 genomes]
rs7628607	0.93[ASN][1000 genomes]
rs7632134	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv516081	chr3:133399702-133412094	Weak transcription Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:133393800-133406800	Weak transcription	Brain Substantia Nigra	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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