The 2.0 version of rSNPBase

Variant report

Variant rs2722658
Chromosome Location chr19:44904897-44904898
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:65 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:44889000-44905000 Weak transcription Right Ventricle heart
2 chr19:44890600-44905000 Weak transcription H9 Cell Line embryonic stem cell
3 chr19:44891400-44905200 Weak transcription Gastric stomach
4 chr19:44892200-44905000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr19:44892400-44905000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr19:44893200-44905000 Weak transcription Muscle Satellite Cultured Cells --
7 chr19:44893600-44905000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr19:44893800-44905200 Weak transcription Thymus Thymus
9 chr19:44894600-44905000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr19:44895000-44905000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr19:44896000-44905000 Weak transcription Osteobl bone
12 chr19:44896400-44905200 Weak transcription Placenta Amnion Placenta Amnion
13 chr19:44897200-44905000 Weak transcription Duodenum Mucosa Duodenum
14 chr19:44897600-44905200 Weak transcription HUVEC blood vessel
15 chr19:44899600-44905200 Weak transcription Rectal Smooth Muscle rectum
16 chr19:44900200-44905000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr19:44900200-44905000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr19:44900200-44905000 Weak transcription Cortex derived primary cultured neurospheres brain
19 chr19:44900200-44905000 Weak transcription Brain Inferior Temporal Lobe brain
20 chr19:44900200-44905200 Weak transcription Aorta Aorta
21 chr19:44900200-44905200 Weak transcription Pancreas Pancrea
22 chr19:44900200-44905200 Weak transcription Psoas Muscle Psoas
23 chr19:44900400-44905000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr19:44900400-44905000 Weak transcription Fetal Intestine Large intestine
25 chr19:44900400-44905000 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr19:44900800-44905000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr19:44901200-44905000 Weak transcription Primary T cells from cord blood blood
28 chr19:44901200-44905000 Weak transcription Brain Cingulate Gyrus brain
29 chr19:44901200-44905000 Weak transcription Fetal Adrenal Gland Adrenal Gland
30 chr19:44901200-44905000 Weak transcription Fetal Muscle Leg muscle
31 chr19:44901200-44905000 Weak transcription Fetal Stomach stomach
32 chr19:44901200-44905000 Weak transcription Skeletal Muscle Male skeletal muscle
33 chr19:44901200-44905200 Weak transcription Left Ventricle heart
34 chr19:44901400-44905000 Weak transcription Primary B cells from peripheral blood blood
35 chr19:44901400-44905000 Weak transcription Brain Anterior Caudate brain
36 chr19:44901600-44905000 Weak transcription Primary T killer naive cells fromperipheralblood blood
37 chr19:44901600-44905000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
38 chr19:44901600-44905000 Weak transcription Skeletal Muscle Female skeletal muscle
39 chr19:44901600-44905000 Weak transcription A549 lung
40 chr19:44901800-44905000 Weak transcription Primary B cells from cord blood blood
41 chr19:44901800-44905000 Weak transcription Brain Angular Gyrus brain
42 chr19:44901800-44905000 Weak transcription Brain Hippocampus Middle brain
43 chr19:44901800-44905000 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr19:44901800-44905000 Weak transcription Ovary ovary
45 chr19:44901800-44905200 Weak transcription Fetal Lung lung
46 chr19:44902800-44905000 Weak transcription Primary hematopoietic stem cells blood
47 chr19:44903000-44905000 Weak transcription Liver Liver
48 chr19:44904600-44906200 Active TSS Fetal Brain Female brain
49 chr19:44904800-44905000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr19:44904800-44905000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015