The 2.0 version of rSNPBase

Variant report

Variant rs274299
Chromosome Location chr10:25233290-25233291
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:25191600-25240600 Weak transcription Stomach Smooth Muscle stomach
2 chr10:25210400-25236600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr10:25210600-25233400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr10:25210600-25233400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr10:25211400-25239800 Weak transcription Fetal Kidney kidney
6 chr10:25215800-25240000 Weak transcription Fetal Muscle Trunk muscle
7 chr10:25218600-25233400 Weak transcription NHLF lung
8 chr10:25218800-25236600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr10:25219000-25236600 Weak transcription Ovary ovary
10 chr10:25219200-25233600 Weak transcription NHDF-Ad bronchial
11 chr10:25219200-25240000 Weak transcription Dnd41 blood
12 chr10:25221400-25233800 Weak transcription Colon Smooth Muscle Colon
13 chr10:25223600-25233400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr10:25224200-25236400 Weak transcription Brain Germinal Matrix brain
15 chr10:25224400-25233400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr10:25224600-25236000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr10:25225400-25240000 Weak transcription Duodenum Mucosa Duodenum
18 chr10:25225400-25240000 Weak transcription Fetal Brain Female brain
19 chr10:25225800-25233600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
20 chr10:25226200-25239800 Weak transcription Fetal Lung lung
21 chr10:25226400-25239200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr10:25227600-25233600 Weak transcription Brain Anterior Caudate brain
23 chr10:25227600-25236600 Weak transcription Pancreas Pancrea
24 chr10:25227800-25233800 Weak transcription Brain Inferior Temporal Lobe brain
25 chr10:25227800-25233800 Weak transcription Brain Substantia Nigra brain
26 chr10:25227800-25235400 Weak transcription Brain Cingulate Gyrus brain
27 chr10:25227800-25235800 Weak transcription Brain Angular Gyrus brain
28 chr10:25228000-25233800 Weak transcription Brain Hippocampus Middle brain
29 chr10:25228000-25235600 Weak transcription Breast Myoepithelial Primary Cells Breast
30 chr10:25228200-25239800 Weak transcription Fetal Stomach stomach
31 chr10:25229800-25236600 Weak transcription Fetal Muscle Leg muscle
32 chr10:25230000-25233600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr10:25232600-25233800 Weak transcription Cortex derived primary cultured neurospheres brain
34 chr10:25232600-25239800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr10:25232800-25234400 Enhancers K562 blood
36 chr10:25232800-25240000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr10:25233000-25234400 Enhancers Fetal Intestine Large intestine
38 chr10:25233200-25233400 Genic enhancers Fetal Intestine Small intestine
39 chr10:25233200-25233600 Enhancers Esophagus oesophagus
40 chr10:25233200-25234400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr10:25233200-25234400 Enhancers A549 lung
42 chr10:25233200-25235000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
43 chr10:25233200-25235000 Enhancers Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015