Variant report

Variant	rs2791807
Chromosome Location	chr6:102387887-102387888
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1340274	0.81[YRI][hapmap]
rs1340275	0.81[YRI][hapmap]
rs1340278	0.81[YRI][hapmap]
rs1340279	0.81[YRI][hapmap]
rs1413971	0.88[YRI][hapmap]
rs1417166	0.81[YRI][hapmap]
rs1417167	0.81[YRI][hapmap]
rs1417168	0.81[YRI][hapmap]
rs1417171	0.81[YRI][hapmap]
rs1417172	0.81[YRI][hapmap]
rs1578289	0.93[AFR][1000 genomes]
rs1578290	0.81[YRI][hapmap]
rs1934672	0.81[YRI][hapmap]
rs2518283	0.85[AFR][1000 genomes]
rs2518284	0.81[YRI][hapmap]
rs2791803	0.81[YRI][hapmap]
rs2791804	0.81[YRI][hapmap]
rs2852587	0.94[YRI][hapmap];0.95[AFR][1000 genomes]
rs2852589	0.81[YRI][hapmap]
rs2852590	0.81[YRI][hapmap]
rs2852596	1.00[ASW][hapmap];1.00[MKK][hapmap]
rs2852597	0.81[YRI][hapmap]
rs2852598	0.81[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1032499	chr6:102069885-102720998	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv830743	chr6:102284082-102459192	Weak transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv886465	chr6:102318339-102466397	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv886466	chr6:102327303-102432398	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv470850	chr6:102343078-102595587	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv830744	chr6:102369761-102566737	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:102387800-102388200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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