Variant report

Variant rs2794719
Chromosome Location chr6:26088890-26088891
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26087400-26089200 Active TSS Brain Cingulate Gyrus brain
2 chr6:26088000-26089000 Flanking Active TSS Duodenum Mucosa Duodenum
3 chr6:26088000-26089000 Flanking Active TSS Dnd41 blood
4 chr6:26088000-26089000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
5 chr6:26088000-26089200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
6 chr6:26088200-26089000 Flanking Active TSS Liver Liver
7 chr6:26088200-26089000 Flanking Active TSS Colonic Mucosa Colon
8 chr6:26088200-26089000 Flanking Active TSS Fetal Intestine Large intestine
9 chr6:26088200-26089000 Flanking Active TSS HSMM muscle
10 chr6:26088200-26089200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
11 chr6:26088200-26089200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr6:26088200-26089200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
13 chr6:26088200-26089200 Flanking Active TSS Muscle Satellite Cultured Cells --
14 chr6:26088200-26089200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr6:26088200-26089200 Flanking Active TSS Adipose Nuclei Adipose
16 chr6:26088200-26089200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
17 chr6:26088200-26089200 Flanking Active TSS Rectal Smooth Muscle rectum
18 chr6:26088200-26089200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
19 chr6:26088200-26089200 Flanking Active TSS GM12878-XiMat blood
20 chr6:26088200-26089200 Flanking Active TSS HMEC breast
21 chr6:26088200-26089200 Flanking Active TSS NHEK skin
22 chr6:26088200-26089200 Flanking Active TSS Osteobl bone
23 chr6:26088400-26089000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr6:26088400-26089000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
25 chr6:26088400-26089000 Weak transcription Aorta Aorta
26 chr6:26088400-26089000 Enhancers Pancreas Pancrea
27 chr6:26088400-26089000 Enhancers Spleen Spleen
28 chr6:26088400-26089200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr6:26088400-26089200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
30 chr6:26088400-26089200 Enhancers Primary Natural Killer cells fromperipheralblood blood
31 chr6:26088400-26089200 Enhancers Cortex derived primary cultured neurospheres brain
32 chr6:26088400-26089200 Enhancers Brain Germinal Matrix brain
33 chr6:26088400-26089200 Flanking Active TSS Colon Smooth Muscle Colon
34 chr6:26088400-26089200 Enhancers Fetal Heart heart
35 chr6:26088400-26089200 Enhancers Right Ventricle heart
36 chr6:26088400-26089200 Flanking Active TSS A549 lung
37 chr6:26088400-26089200 Flanking Active TSS Hela-S3 cervix
38 chr6:26088400-26089800 Enhancers Primary T cells fromperipheralblood blood
39 chr6:26088400-26089800 Enhancers Primary T helper 17 cells PMA-I stimulated --
40 chr6:26088400-26089800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
41 chr6:26088400-26089800 Enhancers Brain Anterior Caudate brain
42 chr6:26088400-26089800 Enhancers Left Ventricle heart
43 chr6:26088400-26089800 Enhancers Sigmoid Colon Sigmoid Colon
44 chr6:26088400-26090800 Weak transcription Placenta Placenta
45 chr6:26088400-26091000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr6:26088400-26104000 Weak transcription Esophagus oesophagus
47 chr6:26088600-26089000 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
48 chr6:26088600-26089000 Enhancers H1 Cell Line embryonic stem cell
49 chr6:26088600-26089000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr6:26088600-26089000 Enhancers HUES64 Cell Line embryonic stem cell

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