Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:13951684..13954071-chr6:13956388..13958549,2	K562	blood:
2	chr6:13943066..13946995-chr6:13951713..13954237,5	K562	blood:
3	chr6:13952122..13954983-chr6:13967783..13969954,2	K562	blood:
4	chr6:13950509..13953508-chr6:13983202..13985851,2	K562	blood:

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs1192057	1.00[CEU][hapmap];0.85[CHB][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs280152	0.91[CEU][hapmap];0.85[CHB][hapmap];0.95[EUR][1000 genomes]
rs280153	0.91[CEU][hapmap];0.85[CHB][hapmap];0.81[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs280154	0.91[CEU][hapmap];0.86[CHB][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7771397	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv600995	chr6:13945067-14009231	Weak transcription Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:13952200-13954000	Enhancers	Hela-S3	cervix
2	chr6:13952200-13954200	Enhancers	NHDF-Ad	bronchial
3	chr6:13952400-13955000	Weak transcription	H1 Cell Line	embryonic stem cell
4	chr6:13952600-13953400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr6:13952600-13953400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr6:13952600-13953800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr6:13952600-13954000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr6:13952600-13954200	Enhancers	HMEC	breast
9	chr6:13952600-13954200	Enhancers	NHEK	skin
10	chr6:13952800-13953400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr6:13952800-13954200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr6:13952800-13954400	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr6:13952800-13954600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr6:13953000-13953800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr6:13953000-13954200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr6:13953000-13954200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
17	chr6:13953200-13953600	Weak transcription	NHLF	lung
18	chr6:13953200-13953800	Enhancers	A549	lung
19	chr6:13953200-13954000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
20	chr6:13953200-13955200	Enhancers	iPS-20b Cell Line	embryonic stem cell

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