Variant report
| Variant | rs2804148 |
|---|---|
| Chromosome Location | chr10:117443212-117443213 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:117435155..117437249-chr10:117442381..117444085,2 | MCF-7 | breast: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:13)
| rs_ID | r2[population] |
|---|---|
| rs10510012 | 1.00[YRI][hapmap] |
| rs10885776 | 0.81[CHB][hapmap] |
| rs11197423 | 0.84[CEU][hapmap] |
| rs17093509 | 0.84[CEU][hapmap] |
| rs17093513 | 0.84[CEU][hapmap] |
| rs2052067 | 0.81[CHB][hapmap] |
| rs2255909 | 1.00[CEU][hapmap];0.88[EUR][1000 genomes] |
| rs2804152 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes] |
| rs2804153 | 1.00[CEU][hapmap];0.88[EUR][1000 genomes] |
| rs2804155 | 0.82[EUR][1000 genomes] |
| rs4491139 | 0.83[EUR][1000 genomes] |
| rs4751923 | 0.81[CHB][hapmap] |
| rs7069993 | 0.81[CHB][hapmap] |
| No data |
Chromatin state (count:0 , 50 per page) page:
| No data |
