Variant report

Variant	rs2804153
Chromosome Location	chr10:117451451-117451452
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs1034939	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1034940	0.80[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11197423	0.85[CEU][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs17093509	0.85[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs17093513	1.00[ASW][hapmap];0.85[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2255909	1.00[ASW][hapmap];1.00[CEU][hapmap];0.83[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs2532725	1.00[LWK][hapmap]
rs2532726	0.82[JPT][hapmap];1.00[LWK][hapmap]
rs2804144	1.00[ASW][hapmap];0.86[MEX][hapmap];0.81[AFR][1000 genomes];0.84[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs2804148	1.00[CEU][hapmap]
rs2804152	0.88[EUR][1000 genomes]
rs2804155	0.90[AFR][1000 genomes];0.95[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2804158	0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs4751927	0.80[JPT][hapmap]
rs7093582	0.81[CHB][hapmap];0.80[JPT][hapmap]
rs7908611	0.81[CHB][hapmap];0.80[JPT][hapmap];0.80[ASN][1000 genomes]

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:117447000-117465600	Weak transcription	HSMM	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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