Variant report

Variant	rs2811891
Chromosome Location	chr1:59161949-59161950
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr1:59149640..59151406-chr1:59161321..59163317,2	K562	blood:
2	chr1:59161094..59162595-chr1:59162952..59165856,2	MCF-7	breast:
3	chr1:59152149..59156069-chr1:59161646..59166160,4	K562	blood:
4	chr1:59124310..59126934-chr1:59160369..59163254,2	K562	blood:
5	chr1:59161816..59163702-chr1:59164064..59166801,2	MCF-7	breast:
6	chr1:59161079..59162975-chr1:59176846..59178891,2	MCF-7	breast:
7	chr1:59155623..59158256-chr1:59160933..59162454,2	MCF-7	breast:
8	chr1:59160810..59163384-chr1:59173119..59175841,2	K562	blood:

No data

Variant related genes	Relation type
ENSG00000162601	Chromatin interaction

rs_ID	r²[population]
rs232893	1.00[AMR][1000 genomes]
rs2760490	1.00[AFR][1000 genomes]
rs2811873	1.00[AFR][1000 genomes]
rs556801	1.00[AMR][1000 genomes]
rs613810	1.00[AMR][1000 genomes]

Chromatin state (count:125 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:59118200-59163400	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr1:59119800-59162200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
3	chr1:59119800-59163200	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr1:59125000-59162200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr1:59139600-59162800	Weak transcription	Fetal Brain Male	brain
6	chr1:59139800-59162000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr1:59146600-59163200	Strong transcription	Osteobl	bone
8	chr1:59148000-59164000	Weak transcription	A549	lung
9	chr1:59148200-59164400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr1:59151000-59163200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr1:59151800-59164400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
12	chr1:59152200-59163200	Strong transcription	Primary B cells from peripheral blood	blood
13	chr1:59153400-59162600	Strong transcription	Monocytes-CD14+_RO01746	blood
14	chr1:59153600-59164400	Weak transcription	Right Atrium	heart
15	chr1:59153600-59164800	Weak transcription	Esophagus	oesophagus
16	chr1:59153800-59162000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
17	chr1:59153800-59164000	Weak transcription	Gastric	stomach
18	chr1:59153800-59165000	Weak transcription	Pancreas	Pancrea
19	chr1:59155200-59164400	Weak transcription	Hela-S3	cervix
20	chr1:59155200-59164600	Weak transcription	HSMMtube	muscle
21	chr1:59155400-59162600	Strong transcription	iPS-18 Cell Line	embryonic stem cell
22	chr1:59156000-59162200	Strong transcription	HUES64 Cell Line	embryonic stem cell
23	chr1:59156200-59162200	Strong transcription	Primary B cells from cord blood	blood
24	chr1:59157000-59162000	Strong transcription	K562	blood
25	chr1:59157000-59164200	Strong transcription	HSMM	muscle
26	chr1:59157600-59162000	Weak transcription	Ovary	ovary
27	chr1:59158000-59164000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
28	chr1:59159200-59164200	Weak transcription	Colonic Mucosa	Colon
29	chr1:59159600-59164000	Weak transcription	Fetal Brain Female	brain
30	chr1:59159800-59164200	Weak transcription	Primary hematopoietic stem cells	blood
31	chr1:59159800-59164200	Weak transcription	Rectal Smooth Muscle	rectum
32	chr1:59159800-59165000	Weak transcription	Small Intestine	intestine
33	chr1:59160000-59162000	Weak transcription	Colon Smooth Muscle	Colon
34	chr1:59160000-59162200	Strong transcription	Muscle Satellite Cultured Cells	--
35	chr1:59160000-59164200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
36	chr1:59160000-59164200	Weak transcription	Placenta Amnion	Placenta Amnion
37	chr1:59160000-59164200	Weak transcription	HMEC	breast
38	chr1:59160000-59164200	Weak transcription	NHDF-Ad	bronchial
39	chr1:59160000-59164400	Weak transcription	Brain Germinal Matrix	brain
40	chr1:59160200-59162800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
41	chr1:59160200-59164200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
42	chr1:59160600-59162000	Weak transcription	Duodenum Smooth Muscle	Duodenum
43	chr1:59160600-59162200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
44	chr1:59160600-59162200	Weak transcription	Fetal Lung	lung
45	chr1:59160600-59162400	Weak transcription	NHEK	skin
46	chr1:59160600-59162400	Weak transcription	NHLF	lung
47	chr1:59160600-59162600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
48	chr1:59160600-59162800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr1:59160600-59163400	Weak transcription	Psoas Muscle	Psoas
50	chr1:59160600-59164000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived

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