Variant report

Variant rs2813671
Chromosome Location chr1:216979494-216979495
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:216977200-216980000 Enhancers Cortex derived primary cultured neurospheres brain
2 chr1:216977200-216980200 Enhancers HUES48 Cell Line embryonic stem cell
3 chr1:216977400-216980200 Enhancers HUES64 Cell Line embryonic stem cell
4 chr1:216978000-216979800 Enhancers iPS-18 Cell Line embryonic stem cell
5 chr1:216978400-216979600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr1:216978600-216979600 Enhancers H1 Cell Line embryonic stem cell
7 chr1:216978600-216979600 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:216978600-216979600 Enhancers H9 Cell Line embryonic stem cell
9 chr1:216978600-216980200 Enhancers Fetal Muscle Leg muscle
10 chr1:216978600-216980400 Enhancers iPS-15b Cell Line embryonic stem cell
11 chr1:216978800-216979800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
12 chr1:216979000-216979600 Flanking Active TSS Brain Hippocampus Middle brain
13 chr1:216979000-216980400 Enhancers Skeletal Muscle Male skeletal muscle
14 chr1:216979000-216980400 Weak transcription HSMMtube muscle
15 chr1:216979000-216980600 Enhancers Skeletal Muscle Female skeletal muscle
16 chr1:216979000-216986200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr1:216979200-216979600 Enhancers Brain Anterior Caudate brain
18 chr1:216979200-216979800 Enhancers Brain Substantia Nigra brain
19 chr1:216979200-216979800 Enhancers Fetal Heart heart
20 chr1:216979200-216980200 Enhancers Brain Germinal Matrix brain
21 chr1:216979400-216979600 Flanking Active TSS Brain Cingulate Gyrus brain
22 chr1:216979400-216979800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
23 chr1:216979400-216980400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:216979400-216980600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr1:216979400-216983000 Weak transcription Psoas Muscle Psoas

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