Variant report

Variant rs2823084
Chromosome Location chr21:16513343-16513344
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr21:16507600-16513800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr21:16508000-16514600 Enhancers Primary hematopoietic stem cells blood
3 chr21:16509400-16514600 Enhancers Fetal Muscle Leg muscle
4 chr21:16509800-16514600 Enhancers Fetal Intestine Small intestine
5 chr21:16509800-16514800 Enhancers Fetal Intestine Large intestine
6 chr21:16510000-16513600 Enhancers Rectal Mucosa Donor 31 rectum
7 chr21:16510000-16513800 Enhancers Skeletal Muscle Male skeletal muscle
8 chr21:16510000-16514400 Enhancers Brain Germinal Matrix brain
9 chr21:16510200-16513600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
10 chr21:16510200-16514600 Enhancers Cortex derived primary cultured neurospheres brain
11 chr21:16510400-16513600 Enhancers Fetal Brain Male brain
12 chr21:16510800-16513800 Enhancers Colonic Mucosa Colon
13 chr21:16510800-16514400 Enhancers Primary hematopoietic stem cells short term culture blood
14 chr21:16511000-16513600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr21:16511200-16514000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr21:16511200-16514000 Weak transcription Esophagus oesophagus
17 chr21:16511200-16514000 Enhancers Skeletal Muscle Female skeletal muscle
18 chr21:16511200-16516200 Weak transcription Adipose Nuclei Adipose
19 chr21:16511400-16513800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr21:16512000-16514400 Enhancers Fetal Kidney kidney
21 chr21:16512200-16514000 Flanking Active TSS Liver Liver
22 chr21:16512400-16514000 Enhancers Brain Hippocampus Middle brain
23 chr21:16512400-16514400 Weak transcription Small Intestine intestine
24 chr21:16512600-16513400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr21:16512600-16514000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr21:16512600-16514200 Enhancers Brain Cingulate Gyrus brain
27 chr21:16512800-16513400 Active TSS Rectal Mucosa Donor 29 rectum
28 chr21:16512800-16514200 Enhancers Primary monocytes fromperipheralblood blood
29 chr21:16512800-16514200 Enhancers Monocytes-CD14+_RO01746 blood
30 chr21:16512800-16515200 Enhancers HepG2 liver
31 chr21:16513000-16513400 Weak transcription Stomach Mucosa stomach
32 chr21:16513000-16513600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr21:16513000-16513800 Enhancers Pancreatic Islets Pancreatic Islet
34 chr21:16513000-16521600 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr21:16513200-16513400 Enhancers Brain Substantia Nigra brain
36 chr21:16513200-16513600 Active TSS Duodenum Mucosa Duodenum
37 chr21:16513200-16513800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr21:16513200-16514000 Weak transcription Fetal Muscle Trunk muscle
39 chr21:16513200-16514000 Weak transcription Left Ventricle heart
40 chr21:16513200-16514200 Weak transcription Pancreas Pancrea
41 chr21:16513200-16514400 Flanking Active TSS A549 lung

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