Variant report

Variant	rs2836626
Chromosome Location	chr21:40058438-40058439
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs2836628	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs2836630	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2836632	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs62217557	0.90[EUR][1000 genomes]
rs62217559	0.90[AFR][1000 genomes];0.98[EUR][1000 genomes]
rs62219260	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62219262	0.95[AFR][1000 genomes];0.94[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62219263	0.96[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs62219264	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62219265	0.95[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62219266	0.96[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs62219267	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs73222057	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs733541	0.84[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40040000-40071200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr21:40054200-40059000	Weak transcription	Aorta	Aorta

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links