Variant report

Variant	rs62217557
Chromosome Location	chr21:40048885-40048886
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 21 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs2836626	0.90[EUR][1000 genomes]
rs2836628	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836630	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2836632	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61428957	1.00[ASN][1000 genomes]
rs62217559	0.88[EUR][1000 genomes]
rs62219260	0.84[EUR][1000 genomes]
rs62219262	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62219263	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62219264	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62219265	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62219266	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62219267	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs715860	1.00[ASN][1000 genomes]
rs7278432	1.00[ASN][1000 genomes]
rs73205515	1.00[ASN][1000 genomes]
rs73220107	1.00[ASN][1000 genomes]
rs73220113	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs73222057	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8134349	1.00[ASN][1000 genomes]
rs8134689	1.00[ASN][1000 genomes]

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40040000-40071200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr21:40047400-40051000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr21:40048000-40049800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr21:40048800-40049000	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
5	chr21:40048800-40051400	Weak transcription	Aorta	Aorta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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