Variant report

Variant	rs62219260
Chromosome Location	chr21:40065045-40065046
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs12627644	0.81[ASN][1000 genomes]
rs16996732	0.81[ASN][1000 genomes]
rs2836609	0.81[ASN][1000 genomes]
rs2836626	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2836628	0.84[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs2836630	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs2836632	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62217557	0.84[EUR][1000 genomes]
rs62217559	0.95[EUR][1000 genomes]
rs62219262	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62219263	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs62219264	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62219265	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62219266	0.88[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs62219267	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7276282	0.81[ASN][1000 genomes]
rs73222057	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs733541	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs73432980	0.81[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:40040000-40071200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr21:40060000-40073200	Weak transcription	Aorta	Aorta
3	chr21:40063400-40065200	Enhancers	HUVEC	blood vessel
4	chr21:40063600-40067400	Weak transcription	Ovary	ovary
5	chr21:40064000-40065600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
6	chr21:40064000-40065600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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