Variant report

Variant	rs28366982
Chromosome Location	chr8:34343914-34343915
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10107624	0.80[ASN][1000 genomes]
rs10503965	0.84[AMR][1000 genomes]
rs12375320	0.93[EUR][1000 genomes]
rs12543513	0.84[AMR][1000 genomes]
rs12543518	0.84[AMR][1000 genomes]
rs12543568	0.84[AMR][1000 genomes]
rs12545278	0.84[AMR][1000 genomes]
rs12546023	0.84[AMR][1000 genomes]
rs12547489	0.84[AMR][1000 genomes]
rs12547877	0.81[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs1445184	0.85[ASN][1000 genomes]
rs16882264	0.83[EUR][1000 genomes]
rs16882360	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16882701	0.84[AMR][1000 genomes]
rs16882703	0.84[AMR][1000 genomes]
rs1822864	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2028776	0.92[EUR][1000 genomes]
rs2044355	0.99[ASN][1000 genomes]
rs2166231	0.99[ASN][1000 genomes]
rs28540657	0.84[AMR][1000 genomes]
rs28545279	0.86[EUR][1000 genomes]
rs2896967	0.98[ASN][1000 genomes]
rs35008961	0.84[AMR][1000 genomes]
rs4263763	0.83[AMR][1000 genomes]
rs4739580	0.80[ASN][1000 genomes]
rs55752257	0.94[EUR][1000 genomes]
rs55787309	0.80[ASN][1000 genomes]
rs56406211	0.80[ASN][1000 genomes]
rs59950658	0.84[AMR][1000 genomes]
rs6468262	0.94[EUR][1000 genomes]
rs6468265	0.87[ASN][1000 genomes]
rs66892402	0.85[ASN][1000 genomes]
rs6991355	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7012499	0.94[EUR][1000 genomes]
rs7827353	0.90[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7827467	0.86[AFR][1000 genomes];0.94[EUR][1000 genomes]
rs7833514	0.99[ASN][1000 genomes]
rs9297220	0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv6147	chr8:34314029-34359124	Weak transcription Enhancers	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:34342800-34344600	Enhancers	iPS-18 Cell Line	embryonic stem cell
2	chr8:34342800-34345000	Enhancers	HUES64 Cell Line	embryonic stem cell
3	chr8:34343000-34344800	Enhancers	iPS-20b Cell Line	embryonic stem cell
4	chr8:34343000-34345000	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr8:34343800-34345800	Enhancers	Fetal Kidney	kidney

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