Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:67242738..67245405-chr8:67248378..67251128,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs10109505	0.93[AMR][1000 genomes];0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1080634	0.92[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16932810	0.89[EUR][1000 genomes]
rs17319640	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs28536124	0.83[EUR][1000 genomes]
rs4324908	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4400362	0.86[ASN][1000 genomes]
rs55804693	0.82[EUR][1000 genomes]
rs56336230	0.85[EUR][1000 genomes]
rs57186740	0.85[ASN][1000 genomes]
rs6472266	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6981785	0.82[EUR][1000 genomes]
rs7010677	0.81[EUR][1000 genomes]
rs7011259	0.81[EUR][1000 genomes]
rs7018347	0.82[EUR][1000 genomes]
rs73691523	0.83[EUR][1000 genomes]
rs7822867	0.84[EUR][1000 genomes]
rs7839868	0.85[EUR][1000 genomes]
rs949987	0.81[EUR][1000 genomes]
rs949988	0.86[ASN][1000 genomes]
rs949989	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446467	chr8:66749863-67667068	Enhancers Genic enhancers Active TSS Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	73 gene(s)	inside rSNPs	diseases
2	esv3414665	chr8:66936816-67381935	Enhancers Active TSS Weak transcription Genic enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	25 gene(s)	inside rSNPs	diseases

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs28371959	ADHFE1	cis	brain	BrainEAC

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67246400-67250000	Enhancers	Primary B cells from peripheral blood	blood
2	chr8:67246600-67249800	Enhancers	Primary B cells from cord blood	blood

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