Variant report

Variant	rs2837438
Chromosome Location	chr21:41498063-41498064
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1734936	0.90[EUR][1000 genomes]
rs2837429	0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2837436	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2837450	0.84[ASW][hapmap];0.85[ASN][1000 genomes]
rs34869212	0.81[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs402435	1.00[CEU][hapmap];0.84[CHB][hapmap];0.82[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7280514	0.83[AFR][1000 genomes];0.92[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7280922	0.85[AMR][1000 genomes];0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs741802	0.88[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs8134334	0.87[EUR][1000 genomes]
rs9978453	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr21:41491800-41510200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr21:41492400-41510400	Weak transcription	Fetal Brain Female	brain
3	chr21:41493000-41510200	Weak transcription	Brain Angular Gyrus	brain
4	chr21:41494200-41511600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
5	chr21:41494800-41506000	Weak transcription	Brain Cingulate Gyrus	brain
6	chr21:41497800-41499000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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