Variant report
| Variant | rs28379196 |
|---|---|
| Chromosome Location | chr15:40685326-40685327 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr15:40676000-40689800 | Weak transcription | Right Atrium | heart |
| 2 | chr15:40676000-40697400 | Weak transcription | Small Intestine | intestine |
| 3 | chr15:40676200-40687200 | Weak transcription | Colonic Mucosa | Colon |
| 4 | chr15:40676200-40690400 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 5 | chr15:40676200-40697200 | Weak transcription | Stomach Mucosa | stomach |
| 6 | chr15:40676400-40687200 | Weak transcription | Right Ventricle | heart |
| 7 | chr15:40676800-40687200 | Strong transcription | H9 Cell Line | embryonic stem cell |
| 8 | chr15:40676800-40688000 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 9 | chr15:40676800-40688400 | Strong transcription | Fetal Thymus | thymus |
| 10 | chr15:40677000-40686800 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
| 11 | chr15:40677000-40688600 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 12 | chr15:40677200-40687400 | Strong transcription | Fetal Muscle Trunk | muscle |
| 13 | chr15:40677200-40687600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 14 | chr15:40677200-40687600 | Strong transcription | Fetal Stomach | stomach |
| 15 | chr15:40677400-40687000 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
| 16 | chr15:40677600-40686600 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
| 17 | chr15:40677600-40687000 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 18 | chr15:40677600-40687600 | Strong transcription | Primary hematopoietic stem cells short term culture | blood |
| 19 | chr15:40677800-40686400 | Strong transcription | Hela-S3 | cervix |
| 20 | chr15:40677800-40688800 | Strong transcription | Foreskin Keratinocyte Primary Cells skin02 | Skin |
| 21 | chr15:40678000-40687400 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 22 | chr15:40678200-40688400 | Strong transcription | Fetal Muscle Leg | muscle |
| 23 | chr15:40678400-40687600 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 24 | chr15:40678600-40686800 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 25 | chr15:40678600-40687600 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 26 | chr15:40678600-40687600 | Strong transcription | Cortex derived primary cultured neurospheres | brain |
| 27 | chr15:40678600-40688000 | Strong transcription | Thymus | Thymus |
| 28 | chr15:40678800-40686200 | Strong transcription | Primary T regulatory cells fromperipheralblood | blood |
| 29 | chr15:40678800-40686200 | Strong transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 30 | chr15:40678800-40686400 | Strong transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 31 | chr15:40678800-40688000 | Strong transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 32 | chr15:40679200-40688400 | Strong transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 33 | chr15:40679400-40686600 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 34 | chr15:40679400-40697400 | Weak transcription | Brain Substantia Nigra | brain |
| 35 | chr15:40679800-40685600 | Weak transcription | Fetal Brain Male | brain |
| 36 | chr15:40679800-40689800 | Weak transcription | Primary T helper memory cells from peripheral blood 2 | blood |
| 37 | chr15:40679800-40690200 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 38 | chr15:40679800-40690200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 39 | chr15:40679800-40690400 | Weak transcription | Pancreas | Pancrea |
| 40 | chr15:40679800-40697200 | Weak transcription | Ovary | ovary |
| 41 | chr15:40679800-40697600 | Weak transcription | Esophagus | oesophagus |
| 42 | chr15:40680000-40685800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 43 | chr15:40680000-40689800 | Weak transcription | Fetal Heart | heart |
| 44 | chr15:40680200-40687600 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
| 45 | chr15:40680800-40686200 | Strong transcription | A549 | lung |
| 46 | chr15:40680800-40686400 | Strong transcription | NH-A | brain |
| 47 | chr15:40680800-40687000 | Strong transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 48 | chr15:40681000-40686200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 49 | chr15:40681000-40686600 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 50 | chr15:40681000-40686800 | Strong transcription | HSMM | muscle |
